Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU6-541P-201ENST00000384709 110 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 MIR32-201ENST00000384965 70 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 RNU4-30P-201ENST00000410245 143 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXD8P13378 RPS15AP7-201ENST00000439294 405 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 AC010285.1-201ENST00000470580 392 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 RNU7-110P-201ENST00000516891 62 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXD8P13378 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 AC021753.1-201ENST00000635724 168 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXD8P13378 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXD8P13378 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXD8P13378 SCN1A-220ENST00000641603 12506 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXD8P13378 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXD8P13378 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXD8P13378 AC010300.1-201ENST00000600671 5134 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXD8P13378 RNU6-525P-201ENST00000363685 104 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 RNU6-740P-201ENST00000364734 105 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 Y_RNA.292-201ENST00000364904 97 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 RNU6-741P-201ENST00000383889 107 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 RNU6-213P-201ENST00000384051 104 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 Y_RNA.569-201ENST00000384749 103 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXD8P13378 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXD8P13378 HSPE1P12-201ENST00000412576 301 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AC005002.2-201ENST00000438228 269 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AC016700.2-201ENST00000446011 156 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 RPS29P26-201ENST00000477483 171 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 RN7SL132P-201ENST00000478131 296 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 MRPL42P6-201ENST00000486397 371 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 SNORD116-28-201ENST00000516123 91 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AC022559.1-201ENST00000520905 205 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AC107016.1-201ENST00000550463 337 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXD8P13378 RPL21P7-201ENST00000557463 483 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXD8P13378 AL078605.1-201ENST00000603529 500 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 MZT1P2-201ENST00000604387 248 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 AC039056.2-201ENST00000622261 511 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 SCARNA4-201ENST00000629045 128 ntBASIC4.59□□□□□ -1.67
HOXD8P13378 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.59□□□□□ -1.68
HOXD8P13378 MAPK10-372ENST00000641954 3413 ntBASIC4.59□□□□□ -1.68
HOXD8P13378 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
HOXD8P13378 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD8P13378 Z82217.1-201ENST00000625157 8149 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXD8P13378 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 MAPK10-303ENST00000641324 3959 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD8P13378 SNORA60-201ENST00000362396 134 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 Y_RNA.304-201ENST00000365011 112 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RNU6-326P-201ENST00000365480 107 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RNU6-629P-201ENST00000384061 103 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 SNORD63-201ENST00000384262 68 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 Y_RNA.504-201ENST00000384481 104 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 MIR195-201ENST00000385194 87 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXD8P13378 RNU2-61P-201ENST00000411069 191 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RNU6-1245P-201ENST00000411130 106 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RPL19P1-201ENST00000411635 428 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 AC011742.1-201ENST00000431448 434 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RPL23AP83-201ENST00000434984 473 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RPS29P7-201ENST00000439662 171 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 AC091021.1-201ENST00000468051 388 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 COX6CP14-201ENST00000469580 174 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 RPL31P13-201ENST00000484151 370 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 MED28P6-201ENST00000558776 231 ntBASIC4.58□□□□□ -1.68
HOXD8P13378 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXD8P13378 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXD8P13378 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXD8P13378 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
HOXD8P13378 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXD8P13378 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD8P13378 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD8P13378 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD8P13378 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD8P13378 RNU6-47P-201ENST00000383866 107 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC098614.2-201ENST00000426040 255 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC006026.2-201ENST00000457376 180 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC146944.2-203ENST00000502493 354 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC139495.1-202ENST00000513164 354 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD8P13378 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD8P13378 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD8P13378 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD8P13378 MIR4782-201ENST00000577987 79 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC010928.2-201ENST00000588017 287 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AL606490.9-201ENST00000603331 271 ntBASIC4.57□□□□□ -1.68
HOXD8P13378 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms