Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP000560.1-201ENST00000624150 1937 ntBASIC1.43□□□□□ -2.18
COL11A1P12107 AC007494.3-201ENST00000624660 743 ntBASIC1.43□□□□□ -2.18
COL11A1P12107 AL159972.1-201ENST00000625150 448 ntBASIC1.43□□□□□ -2.18
COL11A1P12107 AL133216.2-202ENST00000634512 349 ntBASIC1.43□□□□□ -2.18
COL11A1P12107 AL049641.1-201ENST00000441055 1948 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 RNU6-777P-201ENST00000364265 104 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MIR598-201ENST00000384868 97 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 U3.20-201ENST00000390909 217 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.42□□□□□ -2.18
COL11A1P12107 VN1R108P-201ENST00000431580 830 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MTCYBP39-201ENST00000437562 491 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AL445567.1-201ENST00000439121 144 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AL360221.1-201ENST00000445989 335 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MTCO1P27-201ENST00000448269 226 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.42□□□□□ -2.18
COL11A1P12107 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.42□□□□□ -2.18
COL11A1P12107 MTCO2P6-201ENST00000463134 685 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MTND4LP3-201ENST00000468320 276 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AC107626.1-201ENST00000471084 183 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 RPL31P41-201ENST00000477967 372 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 RPS15AP34-201ENST00000487776 387 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 RPF2P2-201ENST00000504693 896 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MIR514B-201ENST00000516774 80 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 SNORA31.18-201ENST00000517043 134 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.42□□□□□ -2.18
COL11A1P12107 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.42□□□□□ -2.18
COL11A1P12107 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL11A1P12107 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.42□□□□□ -2.18
COL11A1P12107 AL137100.2-201ENST00000555786 315 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AC090616.2-202ENST00000584248 222 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 HMGN2P15-201ENST00000585707 270 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.42□□□□□ -2.18
COL11A1P12107 AC097468.3-201ENST00000607956 456 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.42□□□□□ -2.18
COL11A1P12107 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
COL11A1P12107 AL596245.1-201ENST00000618994 362 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.42□□□□□ -2.18
COL11A1P12107 AC017037.3-201ENST00000625016 472 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 MIR7515-201ENST00000637837 67 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 CDC27P3-201ENST00000635418 1910 ntBASIC1.42□□□□□ -2.18
COL11A1P12107 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL11A1P12107 DDX10P1-201ENST00000448545 1933 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL11A1P12107 RNU6-203P-201ENST00000384038 104 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 RNU6-114P-201ENST00000384704 105 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 DHFRP6-201ENST00000401776 268 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AL513475.1-201ENST00000406602 315 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.41□□□□□ -2.18
COL11A1P12107 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.41□□□□□ -2.18
COL11A1P12107 TRGVB-201ENST00000453257 471 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 HMGB1P28-201ENST00000507778 552 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC022447.1-201ENST00000515358 464 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 RNU6-1256P-201ENST00000516539 103 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 RNU6-528P-201ENST00000516926 100 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC026407.1-201ENST00000518369 204 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.41□□□□□ -2.18
COL11A1P12107 AP004247.1-201ENST00000531556 1289 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AL391261.3-201ENST00000557194 520 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 CYCSP2-201ENST00000558168 301 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.41□□□□□ -2.18
COL11A1P12107 MIR544B-201ENST00000582372 78 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.41□□□□□ -2.18
COL11A1P12107 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 MIR6130-201ENST00000619419 109 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC009268.2-201ENST00000621925 457 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC091931.1-201ENST00000623488 728 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC091965.5-201ENST00000624785 342 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 AC092447.10-201ENST00000620607 1652 ntBASIC1.41□□□□□ -2.18
COL11A1P12107 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
COL11A1P12107 Y_RNA.18-201ENST00000362461 102 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 Y_RNA.169-201ENST00000363745 96 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNU6-343P-201ENST00000364709 104 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNU6-621P-201ENST00000364752 109 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNU6-432P-201ENST00000384196 109 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNU6-278P-201ENST00000390945 109 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 AL033519.2-201ENST00000403958 392 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 HMGB1P9-201ENST00000429856 646 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.4□□□□□ -2.18
COL11A1P12107 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.4□□□□□ -2.18
COL11A1P12107 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.4□□□□□ -2.18
COL11A1P12107 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.4□□□□□ -2.18
COL11A1P12107 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.4□□□□□ -2.18
COL11A1P12107 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.4□□□□□ -2.18
COL11A1P12107 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 AC114786.4-201ENST00000508771 728 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 AC114797.1-201ENST00000514003 728 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNU6-759P-201ENST00000516740 103 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 RNA5SP471-201ENST00000516971 106 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.4□□□□□ -2.18
COL11A1P12107 AC022878.1-201ENST00000530684 149 ntBASIC1.4□□□□□ -2.18
COL11A1P12107 AC084364.2-201ENST00000546924 395 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms