Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.32□□□□□ -1.88
PF4V1P10720 RNU6-43P-201ENST00000384302 107 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 MIR554-201ENST00000384874 96 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PF4V1P10720 SNORA48.7-201ENST00000391302 135 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 MIR1179-201ENST00000408703 91 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 RN7SKP167-201ENST00000411047 285 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 CYCSP48-201ENST00000417124 323 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.32□□□□□ -1.88
PF4V1P10720 MTND4P28-201ENST00000426217 387 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 Z82205.1-201ENST00000428456 297 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 Z98742.2-201ENST00000431564 187 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 OR4C10P-201ENST00000434991 931 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.32□□□□□ -1.88
PF4V1P10720 AL031659.1-201ENST00000447075 539 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 ABCF2P2-201ENST00000450549 296 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 RPL30P12-201ENST00000474666 353 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AF213884.1-201ENST00000488102 463 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 SLC25A15P5-201ENST00000508033 253 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 Y_RNA.670-201ENST00000516255 105 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.32□□□□□ -1.88
PF4V1P10720 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.32□□□□□ -1.88
PF4V1P10720 AC115990.1-201ENST00000526957 301 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 AC100770.1-201ENST00000532310 322 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 APOOP3-201ENST00000536787 586 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC091516.1-201ENST00000549191 703 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC109446.1-201ENST00000566172 220 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.32□□□□□ -1.88
PF4V1P10720 AC011494.1-201ENST00000596454 237 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC009229.3-201ENST00000608056 282 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 AC069200.1-201ENST00000609511 323 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 ZNF826P-207ENST00000622273 1910 ntBASIC3.32□□□□□ -1.88
PF4V1P10720 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.32□□□□□ -1.88
PF4V1P10720 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
PF4V1P10720 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PF4V1P10720 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PF4V1P10720 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 RNU6-486P-201ENST00000363116 107 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 RNU6-1188P-201ENST00000363795 107 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 Y_RNA.259-201ENST00000364619 101 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 SNORA37-201ENST00000384504 129 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 SNORA75.4-201ENST00000391278 119 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 RNU6-1140P-201ENST00000410517 106 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 EIF1AXP1-201ENST00000419267 435 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 EIF4EP2-201ENST00000422816 654 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 MICF-203ENST00000432679 129 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
PF4V1P10720 AC009296.1-201ENST00000443146 155 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 RPS3AP46-201ENST00000448352 682 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.31□□□□□ -1.88
PF4V1P10720 SNORD19B-201ENST00000459623 84 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 AC112771.1-201ENST00000463581 102 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 RN7SL132P-201ENST00000478131 296 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PF4V1P10720 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 AC133104.2-201ENST00000615272 193 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 MIR7515-201ENST00000637837 67 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 AC009541.1-201ENST00000438279 2662 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.31□□□□□ -1.88
PF4V1P10720 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PF4V1P10720 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.31□□□□□ -1.88
PF4V1P10720 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PF4V1P10720 AP000560.1-201ENST00000624150 1937 ntBASIC3.31□□□□□ -1.88
PF4V1P10720 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.11-201ENST00000362375 109 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.58-201ENST00000362807 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.154-201ENST00000363624 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNY3P1-201ENST00000365085 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 SNORA62.3-201ENST00000365110 153 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNY3-201ENST00000365484 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.431-201ENST00000384086 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNU6-784P-201ENST00000384330 106 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.490-201ENST00000384413 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNY4P36-201ENST00000391116 96 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RPL21P65-201ENST00000406094 466 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Z98941.1-201ENST00000407764 100 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNU6-174P-201ENST00000410406 106 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RN7SKP61-201ENST00000410642 295 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNA5SP39-201ENST00000411245 120 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC097463.2-201ENST00000421074 142 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms