Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU6-266P-201ENST00000364225 107 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 SNORA71.1-201ENST00000364523 117 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU6-55P-201ENST00000411092 107 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 COTL1P1-201ENST00000422309 375 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC018865.2-201ENST00000423631 129 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 RPL21P41-201ENST00000459863 264 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RPL7P5-201ENST00000471472 736 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 MTND3P25-201ENST00000509243 135 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU1-103P-201ENST00000516502 125 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RNU6-914P-201ENST00000516749 109 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 RN7SKP272-201ENST00000516988 232 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 MED28P6-201ENST00000558776 231 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 LARP7P3-201ENST00000579888 337 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 BDH2P1-201ENST00000602288 736 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC093732.2-201ENST00000607950 274 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 AC083806.3-201ENST00000614016 455 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 7SK.10-201ENST00000621414 298 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 SCARNA15.3-201ENST00000626315 122 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 SCARNA4.1-201ENST00000628597 123 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 MIR4275-201ENST00000636486 87 ntBASIC3.71□□□□□ -1.82
HLA-DOAP06340 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DOAP06340 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DOAP06340 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DOAP06340 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AL356489.2-201ENST00000566968 3528 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNY1P14-201ENST00000384426 108 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNU6-505P-201ENST00000384427 107 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 SNORD73A-201ENST00000386062 65 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 ATG3P1-201ENST00000419507 911 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AL360271.2-201ENST00000447710 161 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 NDUFS5P3-201ENST00000450668 321 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RPS24P6-201ENST00000452670 400 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNU7-187P-201ENST00000458985 68 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC092451.1-201ENST00000480211 153 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AL049873.1-201ENST00000480540 376 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 SUMO2P6-201ENST00000505273 288 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNU6-976P-201ENST00000516086 111 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 Y_RNA.708-201ENST00000516950 96 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNA5SP471-201ENST00000516971 106 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNU6-699P-201ENST00000517081 110 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC104576.1-201ENST00000524225 88 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AP003122.3-201ENST00000526316 255 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC026371.1-201ENST00000551867 419 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 EIF4BP1-201ENST00000554881 351 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC174048.1-201ENST00000603389 144 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC025946.2-201ENST00000603398 234 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC011890.2-201ENST00000613393 294 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 PISRT1.1-201ENST00000616930 107 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 AL360181.4-201ENST00000621752 134 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC006386.2-201ENST00000624491 75 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC012005.1-201ENST00000624575 75 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DOAP06340 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DOAP06340 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DOAP06340 AC058791.1-201ENST00000608412 3198 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DOAP06340 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
HLA-DOAP06340 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOAP06340 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOAP06340 RNU6-512P-201ENST00000364438 103 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 MIR514A1-201ENST00000385133 98 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 MRPL42P3-201ENST00000401492 326 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 HMGB1P27-201ENST00000431429 603 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AL591704.1-201ENST00000432574 275 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms