Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.52□□□□□ -2.01
PDGFBP01127 AC073648.5-201ENST00000603502 305 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AL451064.1-201ENST00000607718 471 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AC091834.1-201ENST00000614543 472 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
PDGFBP01127 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDGFBP01127 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFBP01127 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFBP01127 Y_RNA.318-201ENST00000365131 97 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFBP01127 RNU6-190P-201ENST00000384154 102 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 RNU2-9P-201ENST00000410194 145 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 Y_RNA.595-201ENST00000410403 105 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 RNU2-39P-201ENST00000410604 198 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFBP01127 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFBP01127 AL589823.1-201ENST00000429577 183 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 USP9YP14-201ENST00000430663 563 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 TPT1P7-201ENST00000458300 517 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC006512.1-201ENST00000468816 291 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.51□□□□□ -2.01
PDGFBP01127 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.51□□□□□ -2.01
PDGFBP01127 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.51□□□□□ -2.01
PDGFBP01127 AC108078.2-201ENST00000510750 236 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFBP01127 RN7SKP298-201ENST00000515950 94 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 RNU6-123P-201ENST00000516163 102 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.51□□□□□ -2.01
PDGFBP01127 AL121821.2-201ENST00000556081 394 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFBP01127 AC012119.1-201ENST00000603184 222 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC091152.3-201ENST00000604227 325 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AL670379.4-201ENST00000605279 254 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC107871.2-201ENST00000612894 502 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC099842.1-201ENST00000619919 596 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 AC010338.1-201ENST00000621823 717 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
PDGFBP01127 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFBP01127 AL359854.1-201ENST00000614203 1594 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC073343.1-201ENST00000328239 651 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RPL9P7-201ENST00000330965 580 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 HSPE1P11-201ENST00000339579 310 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU6-486P-201ENST00000363116 107 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 OR5H15-201ENST00000383696 930 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 Y_RNA.559-201ENST00000384686 107 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 MIR1-2-201ENST00000384961 85 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU6-220P-201ENST00000390919 107 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNA5SP213-201ENST00000391031 106 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU6-1328P-201ENST00000410938 106 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.5□□□□□ -2.01
PDGFBP01127 CDK8P2-201ENST00000415020 547 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.5□□□□□ -2.01
PDGFBP01127 MTATP6P16-201ENST00000434543 526 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.5□□□□□ -2.01
PDGFBP01127 AL136380.1-201ENST00000447970 162 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 MTND1P29-201ENST00000448112 647 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC079448.1-201ENST00000449377 373 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.5□□□□□ -2.01
PDGFBP01127 AC007182.2-201ENST00000489251 402 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RBBP4P6-201ENST00000508098 202 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC105313.1-201ENST00000509121 353 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNA5SP112-201ENST00000515937 99 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU6-677P-201ENST00000516914 101 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.5□□□□□ -2.01
PDGFBP01127 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.5□□□□□ -2.01
PDGFBP01127 MTCO3P13-201ENST00000577757 781 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 DEFB131E-202ENST00000602581 683 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC174048.1-201ENST00000603389 144 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC245014.2-201ENST00000603689 287 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AP000942.3-201ENST00000603702 160 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC246785.4-201ENST00000605374 287 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AL021997.1-201ENST00000605757 193 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC069294.1-201ENST00000608397 350 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 HMGB1P24-202ENST00000615653 685 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC072046.2-201ENST00000618366 268 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 AC092656.1-203ENST00000624134 423 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 U6.99-201ENST00000637524 83 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 CKAP2P1-201ENST00000555477 2049 ntBASIC2.5□□□□□ -2.01
PDGFBP01127 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDGFBP01127 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDGFBP01127 Y_RNA.22-201ENST00000362492 102 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RNU6-181P-201ENST00000363225 107 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 SNORA4.3-201ENST00000365564 137 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 Y_RNA.381-201ENST00000365666 102 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 SNORA24.1-201ENST00000384401 135 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RNU6-748P-201ENST00000384648 107 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 MIR558-201ENST00000384920 94 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 CISD1P1-201ENST00000393907 327 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 SNORD88.1-201ENST00000408684 91 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 AL451074.3-201ENST00000437709 472 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms