Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AP000852.1-201ENST00000472460 573 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN1O95832 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN1O95832 SNORA31.1-201ENST00000515993 133 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 SNORA31.5-201ENST00000516190 133 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.673-201ENST00000516306 88 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.676-201ENST00000516393 96 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 RNA5SP290-201ENST00000517133 127 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 SNORA31.26-201ENST00000517250 137 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN1O95832 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC078814.3-201ENST00000553036 491 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AL118558.2-201ENST00000556294 238 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 RNU6-89P-201ENST00000606519 100 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 Z99571.1-201ENST00000636677 394 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN1O95832 MAPK10-322ENST00000641485 4530 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC121333.1-201ENST00000567488 2709 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN1O95832 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN1O95832 U8.2-201ENST00000363156 134 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 RNU6-82P-201ENST00000363970 107 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 RNU6-371P-201ENST00000364283 108 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 MIR325-201ENST00000385260 98 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AL360182.1-201ENST00000397433 468 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN1O95832 RN7SKP58-201ENST00000411010 305 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN1O95832 AC138393.2-201ENST00000414742 246 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.59□□□□□ -1.99
CLDN1O95832 AC007919.1-201ENST00000429380 217 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN1O95832 ERLEC1P1-201ENST00000433806 578 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AL360271.2-201ENST00000447710 161 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN1O95832 RPL21P41-201ENST00000459863 264 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 RPL37P6-201ENST00000460682 294 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 TRBV1-201ENST00000476502 284 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN1O95832 MTCO2P30-201ENST00000503662 364 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC009901.1-201ENST00000506703 541 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN1O95832 AC008549.1-201ENST00000512900 643 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 LRRC34P2-201ENST00000514850 553 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
CLDN1O95832 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN1O95832 AL157871.3-201ENST00000557231 293 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN1O95832 MIR548S-201ENST00000581352 82 ntBASIC2.59□□□□□ -1.99
CLDN1O95832 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.59□□□□□ -1.99
CLDN1O95832 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN1O95832 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN1O95832 CASC19-280ENST00000642102 1351 ntBASIC2.59□□□□□ -2
CLDN1O95832 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.59□□□□□ -2
CLDN1O95832 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -2
CLDN1O95832 AC008264.2-201ENST00000610193 3731 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC093831.2-201ENST00000624393 3427 ntBASIC2.58□□□□□ -2
CLDN1O95832 NACAP2-201ENST00000318548 624 ntBASIC2.58□□□□□ -2
CLDN1O95832 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN1O95832 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN1O95832 Y_RNA.279-201ENST00000364763 95 ntBASIC2.58□□□□□ -2
CLDN1O95832 SNORA4.3-201ENST00000365564 137 ntBASIC2.58□□□□□ -2
CLDN1O95832 U8.9-201ENST00000365667 134 ntBASIC2.58□□□□□ -2
CLDN1O95832 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN1O95832 RNU6-116P-201ENST00000384042 109 ntBASIC2.58□□□□□ -2
CLDN1O95832 SNORA75B-201ENST00000384053 137 ntBASIC2.58□□□□□ -2
CLDN1O95832 SNORA1.3-201ENST00000384676 136 ntBASIC2.58□□□□□ -2
CLDN1O95832 MIR301A-201ENST00000385261 86 ntBASIC2.58□□□□□ -2
CLDN1O95832 MT-TL1-201ENST00000386347 75 ntBASIC2.58□□□□□ -2
CLDN1O95832 SNORA16.2-201ENST00000390991 127 ntBASIC2.58□□□□□ -2
CLDN1O95832 RNA5SP38-201ENST00000410750 119 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 BTF3L4P3-201ENST00000418879 476 ntBASIC2.58□□□□□ -2
CLDN1O95832 ARL5AP1-201ENST00000418991 388 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.58□□□□□ -2
CLDN1O95832 AC093151.1-201ENST00000427711 313 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 GPM6BP2-201ENST00000432046 144 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.58□□□□□ -2
CLDN1O95832 GPM6BP1-201ENST00000446387 144 ntBASIC2.58□□□□□ -2
CLDN1O95832 MTND4P18-201ENST00000447010 465 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms