Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL591623.2-201ENST00000449978 222 ntBASIC5.34□□□□□ -1.55
RNF40O75150 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.34□□□□□ -1.55
RNF40O75150 RPS29P33-201ENST00000456717 146 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC006026.2-201ENST00000457376 180 ntBASIC5.34□□□□□ -1.55
RNF40O75150 snoU13.6-201ENST00000458785 104 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC108751.2-201ENST00000469993 231 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC091179.3-201ENST00000474761 144 ntBASIC5.34□□□□□ -1.55
RNF40O75150 UBE2CP3-201ENST00000502715 450 ntBASIC5.34□□□□□ -1.55
RNF40O75150 SNORD33.1-201ENST00000516213 88 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC107016.1-201ENST00000550463 337 ntBASIC5.34□□□□□ -1.55
RNF40O75150 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF40O75150 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 AC024581.2-201ENST00000619986 252 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC099654.7-201ENST00000635788 2127 ntBASIC5.34□□□□□ -1.55
RNF40O75150 MIR3674-201ENST00000636576 68 ntBASIC5.34□□□□□ -1.55
RNF40O75150 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.34□□□□□ -1.56
RNF40O75150 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF40O75150 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF40O75150 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF40O75150 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF40O75150 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF40O75150 Y_RNA.179-201ENST00000363844 90 ntBASIC5.33□□□□□ -1.56
RNF40O75150 Y_RNA.294-201ENST00000364916 102 ntBASIC5.33□□□□□ -1.56
RNF40O75150 SNORA66-201ENST00000384792 133 ntBASIC5.33□□□□□ -1.56
RNF40O75150 MIR141-201ENST00000384975 95 ntBASIC5.33□□□□□ -1.56
RNF40O75150 MIR15B-201ENST00000385045 98 ntBASIC5.33□□□□□ -1.56
RNF40O75150 RN7SKP61-201ENST00000410642 295 ntBASIC5.33□□□□□ -1.56
RNF40O75150 RN7SKP53-201ENST00000411337 315 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AC016397.1-201ENST00000412463 242 ntBASIC5.33□□□□□ -1.56
RNF40O75150 OR2AM1P-201ENST00000422137 422 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AC007919.1-201ENST00000429380 217 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF40O75150 RN7SL738P-201ENST00000470264 297 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AL132838.2-201ENST00000492041 314 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF40O75150 RPL23AP53-201ENST00000521854 457 ntBASIC5.33□□□□□ -1.56
RNF40O75150 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF40O75150 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 AC108081.1-201ENST00000604358 221 ntBASIC5.33□□□□□ -1.56
RNF40O75150 MIR6844-201ENST00000637122 62 ntBASIC5.33□□□□□ -1.56
RNF40O75150 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF40O75150 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF40O75150 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF40O75150 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 AC010329.5-201ENST00000623497 2174 ntBASIC5.32□□□□□ -1.56
RNF40O75150 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
RNF40O75150 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 LINC01355-201ENST00000566551 5444 ntBASIC5.32□□□□□ -1.56
RNF40O75150 RNU6-235P-201ENST00000362644 107 ntBASIC5.32□□□□□ -1.56
RNF40O75150 SNORA72.4-201ENST00000384174 132 ntBASIC5.32□□□□□ -1.56
RNF40O75150 RNU6-588P-201ENST00000410281 105 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AC074117.2-201ENST00000417130 397 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AL356867.1-201ENST00000429623 299 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF40O75150 GPM6BP3-201ENST00000442797 145 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AL451050.1-201ENST00000450126 415 ntBASIC5.32□□□□□ -1.56
RNF40O75150 KC877373.1-201ENST00000479066 408 ntBASIC5.32□□□□□ -1.56
RNF40O75150 IGLV2-34-201ENST00000490007 283 ntBASIC5.32□□□□□ -1.56
RNF40O75150 ENPP7P9-201ENST00000514456 627 ntBASIC5.32□□□□□ -1.56
RNF40O75150 RN7SKP260-201ENST00000516907 149 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF40O75150 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 MIR4691-201ENST00000583764 85 ntBASIC5.32□□□□□ -1.56
RNF40O75150 RN7SL52P-201ENST00000584271 284 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AL162431.4-201ENST00000604674 411 ntBASIC5.32□□□□□ -1.56
RNF40O75150 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 AP002826.1-201ENST00000608835 315 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AL391261.4-201ENST00000616012 481 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AC068647.2-201ENST00000637380 353 ntBASIC5.32□□□□□ -1.56
RNF40O75150 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 NEAT1-202ENST00000501122 22743 ntBASIC5.32□□□□□ -1.56
RNF40O75150 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF40O75150 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF40O75150 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF40O75150 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF40O75150 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF40O75150 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF40O75150 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF40O75150 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF40O75150 CENPCP1-201ENST00000533085 2578 ntBASIC5.31□□□□□ -1.56
RNF40O75150 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF40O75150 RNU6-1285P-201ENST00000363480 105 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms