Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.35□□□□□ -1.71
CPNE3O75131 AC005086.4-201ENST00000623065 213 ntBASIC4.35□□□□□ -1.71
CPNE3O75131 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CPNE3O75131 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
CPNE3O75131 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CPNE3O75131 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CPNE3O75131 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CPNE3O75131 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CPNE3O75131 ADAM3A-203ENST00000461344 2157 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.34□□□□□ -1.71
CPNE3O75131 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CPNE3O75131 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.34□□□□□ -1.71
CPNE3O75131 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CPNE3O75131 CUL1P1-201ENST00000509510 2425 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC007656.2-201ENST00000624902 4547 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RNU6-280P-201ENST00000364145 104 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 Y_RNA.319-201ENST00000365138 92 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RNU6-1062P-201ENST00000383908 107 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 Y_RNA.462-201ENST00000384268 102 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RNU6-102P-201ENST00000384485 104 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 SNORD58.1-201ENST00000391313 66 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CPNE3O75131 AL356387.2-201ENST00000422272 243 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CPNE3O75131 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.34□□□□□ -1.71
CPNE3O75131 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.34□□□□□ -1.71
CPNE3O75131 HMGN2P10-201ENST00000448085 265 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RNA5SP310-201ENST00000459084 116 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC011276.1-201ENST00000469688 323 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RPS4XP13-201ENST00000483219 789 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC016632.1-201ENST00000503994 196 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 RNU6-496P-201ENST00000516145 99 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 IGLVIV-65-201ENST00000517313 360 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AP006245.1-201ENST00000522549 120 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 TOMM20P2-201ENST00000540082 421 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC027288.2-201ENST00000553028 243 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC009163.5-201ENST00000575421 637 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC005296.1-201ENST00000616145 209 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 AC073308.1-201ENST00000623696 305 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 MIR6830-201ENST00000636015 70 ntBASIC4.34□□□□□ -1.71
CPNE3O75131 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
CPNE3O75131 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CPNE3O75131 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CPNE3O75131 MAPK10-303ENST00000641324 3959 ntBASIC4.34□□□□□ -1.72
CPNE3O75131 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.34□□□□□ -1.72
CPNE3O75131 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.33□□□□□ -1.72
CPNE3O75131 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CPNE3O75131 RNA5SP361-201ENST00000362686 118 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RNU6-270P-201ENST00000364131 105 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RNU6-1141P-201ENST00000364520 107 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RNA5SP515-201ENST00000364570 118 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RNU6-290P-201ENST00000365212 101 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 SNORD63-201ENST00000384262 68 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RNA5SP213-201ENST00000391031 106 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 SNORD12B-201ENST00000410433 91 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RPS12P10-201ENST00000427031 377 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RPL23AP93-201ENST00000440847 484 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 AC096638.1-201ENST00000444678 216 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 PRELID3BP1-201ENST00000457142 540 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RPL21P126-201ENST00000470049 478 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 AC109327.1-201ENST00000471666 403 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 RPS4XP22-201ENST00000480755 780 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 AC006445.2-201ENST00000510061 472 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.33□□□□□ -1.72
CPNE3O75131 MIR5571-201ENST00000577998 113 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
CPNE3O75131 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.33□□□□□ -1.72
CPNE3O75131 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.33□□□□□ -1.72
CPNE3O75131 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPNE3O75131 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CPNE3O75131 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPNE3O75131 MIR448-201ENST00000362131 111 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 RNU4-90P-201ENST00000362773 141 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 RNY1-201ENST00000364228 113 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 Y_RNA.269-201ENST00000364685 89 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 U8.10-201ENST00000384260 133 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 RNA5SP239-201ENST00000410218 129 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 WARS2P1-201ENST00000429678 537 ntBASIC4.32□□□□□ -1.72
CPNE3O75131 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms