Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.68-201ENST00000362881 102 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 Y_RNA.205-201ENST00000364128 113 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.61□□□□□ -2.15
SHOX2O60902 RSU1P2-202ENST00000437884 485 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AC007395.1-201ENST00000451333 677 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.61□□□□□ -2.15
SHOX2O60902 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 SNORA4.4-201ENST00000515921 135 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 SNORA25.11-201ENST00000515935 105 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 RNU5B-3P-201ENST00000516601 115 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 RNU6-64P-201ENST00000517119 105 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AC034114.1-201ENST00000520293 285 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.61□□□□□ -2.15
SHOX2O60902 AC034229.4-201ENST00000607861 441 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AC106052.1-201ENST00000608029 497 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 AC108479.2-201ENST00000617314 601 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 PVT1_3.1-201ENST00000620853 95 ntBASIC1.61□□□□□ -2.15
SHOX2O60902 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.61□□□□□ -2.15
SHOX2O60902 RNU5E-1-201ENST00000362477 120 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RNU6-462P-201ENST00000362659 105 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 MIR583-201ENST00000384846 75 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RNU6-278P-201ENST00000390945 109 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RNU6-817P-201ENST00000391083 104 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHOX2O60902 AC019129.1-201ENST00000403786 261 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RN7SKP101-201ENST00000411376 320 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 OR51A5P-201ENST00000415429 942 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL449283.1-202ENST00000418249 604 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 MTND6P13-201ENST00000443510 523 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.6□□□□□ -2.15
SHOX2O60902 KATNBL1P6-201ENST00000453433 915 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.6□□□□□ -2.15
SHOX2O60902 AC108059.3-201ENST00000456388 214 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 MTCYBP35-201ENST00000503630 1137 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 FAM92A1P2-202ENST00000504766 877 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.6□□□□□ -2.15
SHOX2O60902 AP005639.2-201ENST00000527592 928 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RPL21P5-201ENST00000554662 472 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 RPS3AP4-201ENST00000555161 764 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AC233702.2-202ENST00000562547 291 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 MIR4293-201ENST00000584305 78 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL713866.2-201ENST00000603579 219 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL596327.1-201ENST00000603629 213 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AC131235.4-201ENST00000609288 620 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AC022709.1-201ENST00000615967 87 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AL121895.2-201ENST00000619558 447 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.6□□□□□ -2.15
SHOX2O60902 AC099654.9-201ENST00000637055 678 ntBASIC1.6□□□□□ -2.15
SHOX2O60902 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHOX2O60902 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.59□□□□□ -2.15
SHOX2O60902 RPS25P9-201ENST00000435591 252 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.59□□□□□ -2.15
SHOX2O60902 AC011005.2-201ENST00000487324 359 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 RPL39P36-201ENST00000490784 156 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 RNA5SP182-201ENST00000516064 82 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AC010376.1-201ENST00000522101 334 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 DEFB108A-201ENST00000530110 222 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.59□□□□□ -2.15
SHOX2O60902 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.59□□□□□ -2.15
SHOX2O60902 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.59□□□□□ -2.15
SHOX2O60902 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.59□□□□□ -2.15
SHOX2O60902 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.59□□□□□ -2.15
SHOX2O60902 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.59□□□□□ -2.15
SHOX2O60902 BNIP3P9-201ENST00000603714 553 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.59□□□□□ -2.15
SHOX2O60902 AC096772.1-201ENST00000609146 564 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.59□□□□□ -2.15
SHOX2O60902 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 PART1_2.1-201ENST00000612397 250 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 MIR6515-201ENST00000619843 57 ntBASIC1.59□□□□□ -2.15
SHOX2O60902 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.59□□□□□ -2.15
SHOX2O60902 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SHOX2O60902 RNU6-661P-201ENST00000362409 107 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RNU6-37P-201ENST00000362692 107 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RNU6-11P-201ENST00000364234 107 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 Z98749.2-208ENST00000381646 500 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RNU1-57P-201ENST00000384491 166 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 MIR518A2-201ENST00000384966 87 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 AC078974.1-201ENST00000411597 223 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.58□□□□□ -2.16
SHOX2O60902 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
SHOX2O60902 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.58□□□□□ -2.16
SHOX2O60902 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.58□□□□□ -2.16
SHOX2O60902 BTF3P15-201ENST00000455606 336 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
SHOX2O60902 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms