Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD2O60548 AL133153.1-201ENST00000557756 303 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXD2O60548 RPL23AP84-201ENST00000571193 464 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 AC090615.1-201ENST00000577519 154 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 MIR4293-201ENST00000584305 78 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD2O60548 ELOCP5-201ENST00000604924 333 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 AC007619.2-201ENST00000605743 379 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 AC034102.8-201ENST00000615146 484 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD2O60548 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD2O60548 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.07□□□□□ -1.76
FOXD2O60548 HAUS6P2-201ENST00000433254 2404 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.07□□□□□ -1.76
FOXD2O60548 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXD2O60548 BX322639.1-202ENST00000423987 2213 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD2O60548 AL109809.4-201ENST00000603520 2185 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 RNU1-76P-201ENST00000362903 159 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RNU1-63P-201ENST00000383902 164 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RNU6-434P-201ENST00000384376 107 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD2O60548 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD2O60548 CALM2P2-201ENST00000428512 440 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD2O60548 RNU7-59P-201ENST00000459101 61 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RPS29P19-201ENST00000479709 171 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AC069499.1-201ENST00000489433 509 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD2O60548 AC074250.1-201ENST00000511117 192 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AC093853.1-201ENST00000515689 483 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RNU2-58P-201ENST00000516403 183 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 Y_RNA.687-201ENST00000516558 91 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RNU6-1092P-201ENST00000516955 87 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RNU6-64P-201ENST00000517119 105 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 RANP3-201ENST00000530970 276 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AC006064.5-201ENST00000541782 248 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AC126177.3-201ENST00000551839 688 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AL360157.1-201ENST00000565962 87 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 MIR4300-201ENST00000581016 96 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXD2O60548 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD2O60548 CYP3A51P-201ENST00000633513 256 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 AP001148.1-201ENST00000624124 2359 ntBASIC4.06□□□□□ -1.76
FOXD2O60548 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD2O60548 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
FOXD2O60548 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD2O60548 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 Y_RNA.43-201ENST00000362670 111 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 RNU6-1020P-201ENST00000363684 107 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 RNU6-1303P-201ENST00000364841 107 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 RPS29P13-201ENST00000402041 169 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 UBE2V1P4-201ENST00000425374 344 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXD2O60548 PLGLA-201ENST00000465668 449 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXD2O60548 AC078817.1-201ENST00000492623 435 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 AC074133.1-201ENST00000515696 183 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXD2O60548 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXD2O60548 RPL23AP92-201ENST00000603609 255 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 MIR7151-201ENST00000617477 60 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 SCARNA15.3-201ENST00000626315 122 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXD2O60548 SCARNA4.1-201ENST00000628597 123 ntBASIC4.05□□□□□ -1.76
FOXD2O60548 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD2O60548 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
FOXD2O60548 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
FOXD2O60548 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXD2O60548 AC116667.1-201ENST00000604855 2072 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD2O60548 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD2O60548 RNA5SP391-201ENST00000363456 119 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 MIR183-201ENST00000384958 110 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 RNU6-131P-201ENST00000391144 107 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 RPL21P17-201ENST00000397467 475 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 AL024474.1-201ENST00000404655 591 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 RPS4XP7-201ENST00000406274 780 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 SNORA3.3-201ENST00000408712 125 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 RPS29P4-201ENST00000414733 161 ntBASIC4.04□□□□□ -1.76
FOXD2O60548 RPS23P10-201ENST00000416185 486 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 385.6 ms