Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.54□□□□□ -2
SNX3O60493 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
SNX3O60493 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
SNX3O60493 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.54□□□□□ -2
SNX3O60493 AC074344.1-201ENST00000512823 224 ntBASIC2.54□□□□□ -2
SNX3O60493 RNU2-69P-201ENST00000516061 100 ntBASIC2.54□□□□□ -2
SNX3O60493 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
SNX3O60493 Y_RNA.704-201ENST00000516851 102 ntBASIC2.54□□□□□ -2
SNX3O60493 ACA59.2-201ENST00000517061 156 ntBASIC2.54□□□□□ -2
SNX3O60493 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.54□□□□□ -2
SNX3O60493 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.54□□□□□ -2
SNX3O60493 AK6P1-201ENST00000540219 478 ntBASIC2.54□□□□□ -2
SNX3O60493 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.54□□□□□ -2
SNX3O60493 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.54□□□□□ -2
SNX3O60493 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.54□□□□□ -2
SNX3O60493 RMST_4.1-201ENST00000616886 107 ntBASIC2.54□□□□□ -2
SNX3O60493 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.54□□□□□ -2
SNX3O60493 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.54□□□□□ -2
SNX3O60493 MIR7515-201ENST00000637837 67 ntBASIC2.54□□□□□ -2
SNX3O60493 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNX3O60493 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNX3O60493 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
SNX3O60493 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
SNX3O60493 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.53□□□□□ -2
SNX3O60493 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SNX3O60493 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNX3O60493 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
SNX3O60493 RNU6-1215P-201ENST00000384441 102 ntBASIC2.53□□□□□ -2
SNX3O60493 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
SNX3O60493 AL162578.1-201ENST00000406202 378 ntBASIC2.53□□□□□ -2
SNX3O60493 FTH1P15-201ENST00000406984 280 ntBASIC2.53□□□□□ -2
SNX3O60493 BTF3P7-201ENST00000407097 488 ntBASIC2.53□□□□□ -2
SNX3O60493 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
SNX3O60493 C8orf59P1-201ENST00000429930 303 ntBASIC2.53□□□□□ -2
SNX3O60493 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.53□□□□□ -2
SNX3O60493 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
SNX3O60493 AC004383.1-201ENST00000438135 289 ntBASIC2.53□□□□□ -2
SNX3O60493 RNU6-261P-201ENST00000459506 102 ntBASIC2.53□□□□□ -2
SNX3O60493 LRRC34P2-201ENST00000514850 553 ntBASIC2.53□□□□□ -2
SNX3O60493 RNU5F-8P-201ENST00000515941 111 ntBASIC2.53□□□□□ -2
SNX3O60493 RNU6-835P-201ENST00000516974 104 ntBASIC2.53□□□□□ -2
SNX3O60493 AC087241.2-201ENST00000535801 324 ntBASIC2.53□□□□□ -2
SNX3O60493 HMGB1P33-201ENST00000563485 527 ntBASIC2.53□□□□□ -2
SNX3O60493 LRRC37A5P-203ENST00000580181 585 ntBASIC2.53□□□□□ -2
SNX3O60493 AC025165.5-201ENST00000602802 578 ntBASIC2.53□□□□□ -2
SNX3O60493 AC008739.3-201ENST00000603262 127 ntBASIC2.53□□□□□ -2
SNX3O60493 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.53□□□□□ -2
SNX3O60493 AL031601.2-202ENST00000622650 282 ntBASIC2.53□□□□□ -2
SNX3O60493 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNX3O60493 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNX3O60493 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX3O60493 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RNU6-434P-201ENST00000384376 107 ntBASIC2.52□□□□□ -2.01
SNX3O60493 MIR34A-201ENST00000385130 110 ntBASIC2.52□□□□□ -2.01
SNX3O60493 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SNX3O60493 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RPL17P50-201ENST00000396131 546 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RNU6-1328P-201ENST00000410938 106 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 MTCO1P21-201ENST00000416634 589 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 MTND3P21-201ENST00000433774 331 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 PRPS1P1-201ENST00000445305 876 ntBASIC2.52□□□□□ -2.01
SNX3O60493 Z96811.1-201ENST00000445880 108 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 AL121769.1-201ENST00000469473 401 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AIG1P1-201ENST00000503376 148 ntBASIC2.52□□□□□ -2.01
SNX3O60493 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 RNA5SP401-201ENST00000515920 127 ntBASIC2.52□□□□□ -2.01
SNX3O60493 Y_RNA.687-201ENST00000516558 91 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RN7SKP57-201ENST00000517248 293 ntBASIC2.52□□□□□ -2.01
SNX3O60493 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 AC027807.1-201ENST00000559921 996 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX3O60493 AC106782.4-201ENST00000568264 210 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC007336.1-201ENST00000576365 3828 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC138761.3-201ENST00000579993 334 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX3O60493 OR1M4P-201ENST00000589199 287 ntBASIC2.52□□□□□ -2.01
SNX3O60493 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AL137843.1-201ENST00000605078 385 ntBASIC2.52□□□□□ -2.01
SNX3O60493 uc_338.34-201ENST00000617467 174 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms