Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 Y_RNA.2-201ENST00000362330 96 ntBASIC3.48□□□□□ -1.85
PEX1O43933 RNU6-173P-201ENST00000364215 104 ntBASIC3.48□□□□□ -1.85
PEX1O43933 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.48□□□□□ -1.85
PEX1O43933 RNU6-1179P-201ENST00000384667 107 ntBASIC3.48□□□□□ -1.85
PEX1O43933 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
PEX1O43933 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PEX1O43933 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.48□□□□□ -1.85
PEX1O43933 Z85995.1-201ENST00000415547 335 ntBASIC3.48□□□□□ -1.85
PEX1O43933 SYF2P2-201ENST00000417620 583 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC008267.5-201ENST00000424928 265 ntBASIC3.48□□□□□ -1.85
PEX1O43933 UBE2V1P4-201ENST00000425374 344 ntBASIC3.48□□□□□ -1.85
PEX1O43933 USMG5P1-201ENST00000425964 177 ntBASIC3.48□□□□□ -1.85
PEX1O43933 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX1O43933 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX1O43933 RPS24P6-201ENST00000452670 400 ntBASIC3.48□□□□□ -1.85
PEX1O43933 U3.44-201ENST00000458938 192 ntBASIC3.48□□□□□ -1.85
PEX1O43933 snoU13.24-201ENST00000458998 104 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC034236.1-201ENST00000469891 373 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX1O43933 AC022493.2-201ENST00000506122 481 ntBASIC3.48□□□□□ -1.85
PEX1O43933 SNORA25.10-201ENST00000515926 124 ntBASIC3.48□□□□□ -1.85
PEX1O43933 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
PEX1O43933 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
PEX1O43933 RNU6-1315P-201ENST00000517187 99 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC068657.1-201ENST00000520807 306 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX1O43933 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX1O43933 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.48□□□□□ -1.85
PEX1O43933 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX1O43933 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX1O43933 AC010653.1-201ENST00000571108 881 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC002545.1-201ENST00000592511 181 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX1O43933 AC008739.3-201ENST00000603262 127 ntBASIC3.48□□□□□ -1.85
PEX1O43933 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX1O43933 SNORD39.4-201ENST00000620099 78 ntBASIC3.48□□□□□ -1.85
PEX1O43933 AL360181.4-201ENST00000621752 134 ntBASIC3.48□□□□□ -1.85
PEX1O43933 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PEX1O43933 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PEX1O43933 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX1O43933 AC118273.1-201ENST00000525324 3006 ntBASIC3.47□□□□□ -1.85
PEX1O43933 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX1O43933 RNU6-490P-201ENST00000362985 107 ntBASIC3.47□□□□□ -1.85
PEX1O43933 Y_RNA.324-201ENST00000365165 102 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC117470.1-201ENST00000381974 330 ntBASIC3.47□□□□□ -1.85
PEX1O43933 SNORA5A-201ENST00000384111 134 ntBASIC3.47□□□□□ -1.85
PEX1O43933 RNU6-196P-201ENST00000384315 107 ntBASIC3.47□□□□□ -1.85
PEX1O43933 MIR449B-201ENST00000384995 97 ntBASIC3.47□□□□□ -1.85
PEX1O43933 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PEX1O43933 Y_RNA.645-201ENST00000391229 102 ntBASIC3.47□□□□□ -1.85
PEX1O43933 RPL21P17-201ENST00000397467 475 ntBASIC3.47□□□□□ -1.85
PEX1O43933 HMGB3P2-201ENST00000411913 584 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX1O43933 AC093578.1-201ENST00000415219 368 ntBASIC3.47□□□□□ -1.85
PEX1O43933 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PEX1O43933 AL035423.1-201ENST00000420331 213 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AP000907.1-201ENST00000428428 510 ntBASIC3.47□□□□□ -1.85
PEX1O43933 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX1O43933 SNRPEP4-201ENST00000435815 279 ntBASIC3.47□□□□□ -1.85
PEX1O43933 HMGN2P20-201ENST00000437531 273 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX1O43933 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX1O43933 AL358232.1-201ENST00000448030 501 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX1O43933 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX1O43933 AC091153.1-201ENST00000466297 402 ntBASIC3.47□□□□□ -1.85
PEX1O43933 RPS15AP34-201ENST00000487776 387 ntBASIC3.47□□□□□ -1.85
PEX1O43933 MTND4LP22-201ENST00000508209 276 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC008716.1-201ENST00000511084 513 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX1O43933 RNU6-764P-201ENST00000516396 105 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.47□□□□□ -1.85
PEX1O43933 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX1O43933 TRAV37-201ENST00000553906 342 ntBASIC3.47□□□□□ -1.85
PEX1O43933 MIR1273C-201ENST00000578669 77 ntBASIC3.47□□□□□ -1.85
PEX1O43933 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC107294.3-201ENST00000609211 526 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AL162373.1-201ENST00000620433 407 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AC022149.2-201ENST00000621061 203 ntBASIC3.47□□□□□ -1.85
PEX1O43933 AL034408.1-202ENST00000636088 415 ntBASIC3.47□□□□□ -1.85
PEX1O43933 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PEX1O43933 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX1O43933 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX1O43933 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX1O43933 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PEX1O43933 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.46□□□□□ -1.85
PEX1O43933 CDC27P3-201ENST00000635418 1910 ntBASIC3.46□□□□□ -1.85
PEX1O43933 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX1O43933 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PEX1O43933 SRP72P2-201ENST00000344851 1979 ntBASIC3.46□□□□□ -1.86
PEX1O43933 DEFB108F-201ENST00000344638 222 ntBASIC3.46□□□□□ -1.86
PEX1O43933 RNA5SP383-201ENST00000362934 120 ntBASIC3.46□□□□□ -1.86
PEX1O43933 RNU6-384P-201ENST00000364900 104 ntBASIC3.46□□□□□ -1.86
PEX1O43933 MIR607-201ENST00000385241 96 ntBASIC3.46□□□□□ -1.86
PEX1O43933 RNA5SP424-201ENST00000390988 115 ntBASIC3.46□□□□□ -1.86
PEX1O43933 AC245291.1-201ENST00000419501 328 ntBASIC3.46□□□□□ -1.86
PEX1O43933 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX1O43933 MRPS18CP6-201ENST00000423587 223 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms