Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UBE2FP1-201ENST00000416536 447 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 SSXP9-201ENST00000417503 292 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 MIR2053-201ENST00000459295 91 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 ST13P14-201ENST00000474095 734 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RNU6-189P-201ENST00000516120 101 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.2□□□□□ -1.9
SMAD6O43541 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.2□□□□□ -1.9
SMAD6O43541 AC008521.1-201ENST00000587471 187 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AC005000.2-201ENST00000605468 310 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AC012409.4-201ENST00000612923 249 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AL355810.1-201ENST00000614629 552 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AC103705.1-201ENST00000619013 241 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
SMAD6O43541 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMAD6O43541 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SMAD6O43541 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMAD6O43541 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
SMAD6O43541 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SMAD6O43541 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMAD6O43541 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMAD6O43541 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 CD24P4-201ENST00000382840 243 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 SNORD116-11-201ENST00000383882 92 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-196P-201ENST00000384315 107 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 Y_RNA.482-201ENST00000384377 111 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-601P-201ENST00000384540 107 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-310P-201ENST00000384655 107 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-1106P-201ENST00000390845 107 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RPL21P24-201ENST00000413752 448 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AC092447.6-201ENST00000414578 210 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.19□□□□□ -1.9
SMAD6O43541 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
SMAD6O43541 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 UBE2D3P2-201ENST00000424409 445 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.19□□□□□ -1.9
SMAD6O43541 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SMAD6O43541 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 RN7SKP295-201ENST00000517264 153 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 SNRPGP16-201ENST00000533275 226 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 CR383656.7-201ENST00000548164 174 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
SMAD6O43541 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SMAD6O43541 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
SMAD6O43541 ZNF519P1-201ENST00000449011 1626 ntBASIC3.19□□□□□ -1.9
SMAD6O43541 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
SMAD6O43541 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMAD6O43541 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMAD6O43541 CUL1P1-201ENST00000509510 2425 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMAD6O43541 Y_RNA.135-201ENST00000363439 95 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RNU6-1284P-201ENST00000363701 100 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 SMIM11P1-201ENST00000369586 178 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RNU6-946P-201ENST00000383878 107 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 MIR568-201ENST00000385036 95 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 SNORA48.5-201ENST00000391143 135 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 CISD1P1-201ENST00000393907 327 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 Y_RNA.646-201ENST00000410980 101 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RPS12P24-201ENST00000412619 387 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 BX682237.1-201ENST00000415016 335 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.18□□□□□ -1.9
SMAD6O43541 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.18□□□□□ -1.9
SMAD6O43541 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 GAPDHP27-201ENST00000447427 1020 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RPL23AP31-201ENST00000456160 467 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 snoU109.4-201ENST00000458953 143 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RNA5SP310-201ENST00000459084 116 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RN7SL432P-201ENST00000484057 298 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC008526.1-201ENST00000509149 338 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 HIGD1AP13-201ENST00000509878 289 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.18□□□□□ -1.9
SMAD6O43541 TBCAP3-201ENST00000512475 312 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.18□□□□□ -1.9
SMAD6O43541 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms