Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDX4O14627 RPL7P37-201ENST00000425095 738 ntBASIC2.34□□□□□ -2.03
CDX4O14627 ELOCP14-201ENST00000428070 331 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.34□□□□□ -2.03
CDX4O14627 GPM6BP2-201ENST00000432046 144 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.34□□□□□ -2.03
CDX4O14627 RPS15AP9-201ENST00000439856 381 ntBASIC2.34□□□□□ -2.03
CDX4O14627 ELOCP7-201ENST00000439968 331 ntBASIC2.34□□□□□ -2.03
CDX4O14627 MTND4P25-201ENST00000441039 533 ntBASIC2.34□□□□□ -2.03
CDX4O14627 GPM6BP1-201ENST00000446387 144 ntBASIC2.34□□□□□ -2.03
CDX4O14627 FGF7P6-202ENST00000451282 293 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC027673.1-201ENST00000456245 405 ntBASIC2.34□□□□□ -2.03
CDX4O14627 RNU7-23P-201ENST00000459465 62 ntBASIC2.34□□□□□ -2.03
CDX4O14627 RPL36AP51-201ENST00000487216 318 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.34□□□□□ -2.03
CDX4O14627 FAM92A1P2-202ENST00000504766 877 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC009901.1-201ENST00000506703 541 ntBASIC2.34□□□□□ -2.03
CDX4O14627 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDX4O14627 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX4O14627 SCARNA24.1-201ENST00000516465 137 ntBASIC2.34□□□□□ -2.03
CDX4O14627 RN7SKP219-201ENST00000516825 296 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC090572.1-201ENST00000519251 160 ntBASIC2.34□□□□□ -2.03
CDX4O14627 CKS1BP7-201ENST00000522230 235 ntBASIC2.34□□□□□ -2.03
CDX4O14627 OR5AQ1P-201ENST00000527596 927 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC007536.1-201ENST00000533382 349 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX4O14627 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX4O14627 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX4O14627 AP000907.4-201ENST00000604143 237 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AL161798.1-201ENST00000604630 131 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AP002360.4-201ENST00000606980 481 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AP001596.2-201ENST00000608410 312 ntBASIC2.34□□□□□ -2.03
CDX4O14627 FTX_3.1-201ENST00000610451 147 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AL365204.3-201ENST00000612448 685 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AC139792.3-201ENST00000623525 224 ntBASIC2.34□□□□□ -2.03
CDX4O14627 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX4O14627 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
CDX4O14627 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX4O14627 MIR3688-2-201ENST00000636963 87 ntBASIC2.34□□□□□ -2.03
CDX4O14627 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.34□□□□□ -2.04
CDX4O14627 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.34□□□□□ -2.04
CDX4O14627 AC099654.7-201ENST00000635788 2127 ntBASIC2.33□□□□□ -2.04
CDX4O14627 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDX4O14627 AC069528.2-201ENST00000624849 1991 ntBASIC2.33□□□□□ -2.04
CDX4O14627 Y_RNA.9-201ENST00000362354 101 ntBASIC2.33□□□□□ -2.04
CDX4O14627 RNU1-105P-201ENST00000363470 161 ntBASIC2.33□□□□□ -2.04
CDX4O14627 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDX4O14627 RNU6-483P-201ENST00000384088 108 ntBASIC2.33□□□□□ -2.04
CDX4O14627 Y_RNA.453-201ENST00000384223 109 ntBASIC2.33□□□□□ -2.04
CDX4O14627 RNU6-39P-201ENST00000384344 107 ntBASIC2.33□□□□□ -2.04
CDX4O14627 RNU2-68P-201ENST00000410878 191 ntBASIC2.33□□□□□ -2.04
CDX4O14627 RNA5SP344-201ENST00000411081 104 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX4O14627 MTND4LP11-201ENST00000422184 280 ntBASIC2.33□□□□□ -2.04
CDX4O14627 MED13P1-201ENST00000428342 171 ntBASIC2.33□□□□□ -2.04
CDX4O14627 MTND1P2-201ENST00000430604 821 ntBASIC2.33□□□□□ -2.04
CDX4O14627 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 SNRPEP9-201ENST00000436794 238 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.33□□□□□ -2.04
CDX4O14627 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 DDX3P2-201ENST00000446138 111 ntBASIC2.33□□□□□ -2.04
CDX4O14627 MTND4P18-201ENST00000447010 465 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX4O14627 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 HMGB1P41-201ENST00000520234 440 ntBASIC2.33□□□□□ -2.04
CDX4O14627 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDX4O14627 SNRPGP18-201ENST00000553000 214 ntBASIC2.33□□□□□ -2.04
CDX4O14627 OR11H5P-201ENST00000554039 926 ntBASIC2.33□□□□□ -2.04
CDX4O14627 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX4O14627 HMGB1P33-201ENST00000563485 527 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.33□□□□□ -2.04
CDX4O14627 AC012507.3-201ENST00000603556 477 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC025449.1-201ENST00000603896 529 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC007363.1-201ENST00000604736 620 ntBASIC2.33□□□□□ -2.04
CDX4O14627 AC017083.3-201ENST00000609955 700 ntBASIC2.33□□□□□ -2.04
CDX4O14627 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
CDX4O14627 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDX4O14627 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX4O14627 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX4O14627 AC008669.1-201ENST00000565823 2178 ntBASIC2.32□□□□□ -2.04
CDX4O14627 RNU6-1085P-201ENST00000363576 107 ntBASIC2.32□□□□□ -2.04
CDX4O14627 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDX4O14627 RNU6-190P-201ENST00000384154 102 ntBASIC2.32□□□□□ -2.04
CDX4O14627 MIR558-201ENST00000384920 94 ntBASIC2.32□□□□□ -2.04
CDX4O14627 MIR1-2-201ENST00000384961 85 ntBASIC2.32□□□□□ -2.04
CDX4O14627 SNORA26.7-201ENST00000391288 122 ntBASIC2.32□□□□□ -2.04
CDX4O14627 CIR1P3-201ENST00000405137 479 ntBASIC2.32□□□□□ -2.04
CDX4O14627 RNU2-9P-201ENST00000410194 145 ntBASIC2.32□□□□□ -2.04
CDX4O14627 MTATP6P18-201ENST00000417994 673 ntBASIC2.32□□□□□ -2.04
CDX4O14627 TIMM9P3-201ENST00000428659 274 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 NFU1P2-201ENST00000448700 469 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AC133134.1-201ENST00000466800 359 ntBASIC2.32□□□□□ -2.04
CDX4O14627 MTAPP1-201ENST00000489154 819 ntBASIC2.32□□□□□ -2.04
CDX4O14627 RPL39P36-201ENST00000490784 156 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AC079382.1-201ENST00000493346 557 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms