Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.8□□□□□ -1.96
AP3D1O14617 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.8□□□□□ -1.96
AP3D1O14617 RPL7P20-201ENST00000520308 745 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 BNIP3P6-201ENST00000549284 499 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.8□□□□□ -1.96
AP3D1O14617 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AC105245.1-201ENST00000581934 244 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.8□□□□□ -1.96
AP3D1O14617 AL121917.1-203ENST00000605534 577 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 MIR92B-201ENST00000607575 96 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AC069294.1-201ENST00000608397 350 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.8□□□□□ -1.96
AP3D1O14617 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
AP3D1O14617 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.8□□□□□ -1.96
AP3D1O14617 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.8□□□□□ -1.96
AP3D1O14617 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.8□□□□□ -1.96
AP3D1O14617 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.79□□□□□ -1.96
AP3D1O14617 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP3D1O14617 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP3D1O14617 SNORA63.1-201ENST00000362493 131 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 Y_RNA.41-201ENST00000362646 102 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 VTRNA1-1-201ENST00000363120 99 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 Y_RNA.480-201ENST00000384364 102 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 Y_RNA.481-201ENST00000384373 102 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 SNORD116-20-201ENST00000384529 92 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 MIR34B-201ENST00000385076 84 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 CALM2P3-201ENST00000400429 449 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.79□□□□□ -1.96
AP3D1O14617 TIMM9P3-201ENST00000428659 274 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.79□□□□□ -1.96
AP3D1O14617 MTND1P1-201ENST00000445453 368 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 PSPHP1-201ENST00000450062 261 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 BX510359.1-201ENST00000456973 237 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC112771.1-201ENST00000463581 102 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC096576.1-201ENST00000489014 359 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.79□□□□□ -1.96
AP3D1O14617 RN7SKP272-201ENST00000516988 232 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC136619.2-201ENST00000563361 631 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC023824.2-201ENST00000566185 400 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 MIR5583-1-201ENST00000580941 59 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 MIR4424-201ENST00000585257 86 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3D1O14617 SRGNP1-201ENST00000603392 451 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC021646.1-201ENST00000605469 484 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC015540.1-201ENST00000615828 501 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AC010338.1-201ENST00000621823 717 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 AP003400.5-201ENST00000624827 617 ntBASIC2.79□□□□□ -1.96
AP3D1O14617 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
AP3D1O14617 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.79□□□□□ -1.96
AP3D1O14617 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
AP3D1O14617 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
AP3D1O14617 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP3D1O14617 RNU6-78P-201ENST00000362897 107 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 RNU6-622P-201ENST00000384272 103 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 SNORA54-201ENST00000384281 123 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 OR9R1P-201ENST00000412200 877 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3D1O14617 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3D1O14617 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.78□□□□□ -1.96
AP3D1O14617 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3D1O14617 AL365400.1-201ENST00000431854 640 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.78□□□□□ -1.96
AP3D1O14617 HMGB1P31-201ENST00000437242 427 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 RPL7P54-201ENST00000438336 674 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3D1O14617 RNU6-261P-201ENST00000459506 102 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 SRRM1P2-201ENST00000464531 1192 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AP001025.1-201ENST00000486139 332 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AC090096.1-201ENST00000489168 390 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 MTCYBP40-201ENST00000509390 1135 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3D1O14617 SNORA25.17-201ENST00000517184 124 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 SNORA31.23-201ENST00000517219 133 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AC109329.2-201ENST00000519658 482 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.78□□□□□ -1.96
AP3D1O14617 AC096772.1-201ENST00000609146 564 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3D1O14617 AC007318.2-201ENST00000620999 243 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
AP3D1O14617 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
AP3D1O14617 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.97
AP3D1O14617 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
AP3D1O14617 RNU6-1085P-201ENST00000363576 107 ntBASIC2.77□□□□□ -1.97
AP3D1O14617 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
AP3D1O14617 SNORD116-4-201ENST00000384733 96 ntBASIC2.77□□□□□ -1.97
AP3D1O14617 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
AP3D1O14617 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP3D1O14617 AC074117.2-201ENST00000417130 397 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms