Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 AC243829.7-201ENST00000633081 225 ntBASIC2.54□□□□□ -2
TRAFD1O14545 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAFD1O14545 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TRAFD1O14545 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.54□□□□□ -2
TRAFD1O14545 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
TRAFD1O14545 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRAFD1O14545 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAFD1O14545 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAFD1O14545 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 RNU6-483P-201ENST00000384088 108 ntBASIC2.53□□□□□ -2
TRAFD1O14545 RNU6-217P-201ENST00000384164 104 ntBASIC2.53□□□□□ -2
TRAFD1O14545 SNORD115-47-201ENST00000391226 86 ntBASIC2.53□□□□□ -2
TRAFD1O14545 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAFD1O14545 BX682237.1-201ENST00000415016 335 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.53□□□□□ -2
TRAFD1O14545 AC009963.1-201ENST00000417265 157 ntBASIC2.53□□□□□ -2
TRAFD1O14545 RPL7P37-201ENST00000425095 738 ntBASIC2.53□□□□□ -2
TRAFD1O14545 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 AC000111.3-201ENST00000433478 193 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 MTND1P18-201ENST00000448191 573 ntBASIC2.53□□□□□ -2
TRAFD1O14545 FABP5P15-201ENST00000453566 214 ntBASIC2.53□□□□□ -2
TRAFD1O14545 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 RPS27P26-201ENST00000494583 239 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 RNU6-143P-201ENST00000516942 93 ntBASIC2.53□□□□□ -2
TRAFD1O14545 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
TRAFD1O14545 CKS1BP7-201ENST00000522230 235 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.53□□□□□ -2
TRAFD1O14545 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.53□□□□□ -2
TRAFD1O14545 AC107294.1-201ENST00000609524 467 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AC017083.3-201ENST00000609955 700 ntBASIC2.53□□□□□ -2
TRAFD1O14545 AL359547.2-201ENST00000615810 418 ntBASIC2.53□□□□□ -2
TRAFD1O14545 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.53□□□□□ -2
TRAFD1O14545 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
TRAFD1O14545 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.53□□□□□ -2
TRAFD1O14545 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.53□□□□□ -2
TRAFD1O14545 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.53□□□□□ -2
TRAFD1O14545 MTND5P17-201ENST00000418405 1603 ntBASIC2.53□□□□□ -2
TRAFD1O14545 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.53□□□□□ -2.01
TRAFD1O14545 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.53□□□□□ -2.01
TRAFD1O14545 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 Y_RNA.6-201ENST00000362350 114 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 RNU6-996P-201ENST00000365438 107 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 Y_RNA.534-201ENST00000384599 112 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 SNORA67.4-201ENST00000384688 142 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 RNU6-606P-201ENST00000384721 111 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 RNU6-550P-201ENST00000391057 101 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 AL160275.3-201ENST00000423876 471 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.52□□□□□ -2.01
TRAFD1O14545 SNRPEP9-201ENST00000436794 238 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AC092989.1-201ENST00000481235 277 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AC109927.2-201ENST00000506416 303 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC027176.1-201ENST00000560204 514 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.52□□□□□ -2.01
TRAFD1O14545 MIR4703-201ENST00000577728 79 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 MIR5583-1-201ENST00000580941 59 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC025165.5-201ENST00000602802 578 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AL645944.1-201ENST00000603857 493 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC007621.1-201ENST00000604544 437 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC093788.1-201ENST00000609356 927 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 FTX_3.1-201ENST00000610451 147 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC024940.5-201ENST00000622889 474 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAFD1O14545 AL137003.2-201ENST00000606924 2538 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 AC103710.2-202ENST00000641454 2853 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 HSPA8P4-201ENST00000511877 1920 ntBASIC2.52□□□□□ -2.01
TRAFD1O14545 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAFD1O14545 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAFD1O14545 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
TRAFD1O14545 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRAFD1O14545 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAFD1O14545 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
TRAFD1O14545 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAFD1O14545 Y_RNA.500-201ENST00000384466 111 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 RNA5SP354-201ENST00000391247 136 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 RNU2-68P-201ENST00000410878 191 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 FCF1P9-201ENST00000412546 282 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 OR6C66P-201ENST00000414917 930 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms