Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN4O00479 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN4O00479 MTCO3P5-201ENST00000433620 714 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN4O00479 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN4O00479 RPL32P14-201ENST00000463196 378 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 MTCO1P31-201ENST00000506355 492 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 RNU6-416P-201ENST00000516265 103 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AC136628.3-201ENST00000521868 290 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AP000763.2-201ENST00000540641 163 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN4O00479 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN4O00479 SUB1P4-201ENST00000566062 339 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN4O00479 MIR3937-201ENST00000580135 106 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN4O00479 AP000860.1-201ENST00000605250 559 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 BX284668.6-201ENST00000606899 438 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 AC084824.5-201ENST00000612009 413 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 MTCO1P18-201ENST00000455518 1419 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 ZNF849P-201ENST00000594711 1566 ntBASIC0.43□□□□□ -2.34
HMGN4O00479 Y_RNA.4-201ENST00000362333 112 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 RNU5E-8P-201ENST00000363502 116 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 SNORA25-201ENST00000384384 134 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 MIR525-201ENST00000384978 85 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 CBX3P6-201ENST00000430257 527 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 JTBP1-201ENST00000441314 247 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN4O00479 AC002381.1-201ENST00000447049 280 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC011005.2-201ENST00000487324 359 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN4O00479 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.42□□□□□ -2.34
HMGN4O00479 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN4O00479 RNU6-586P-201ENST00000517265 104 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 MTCO2P15-201ENST00000532655 656 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN4O00479 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN4O00479 BPTFP1-201ENST00000579209 492 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 MIR4452-201ENST00000583004 71 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN4O00479 AC112220.3-201ENST00000605502 502 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AL022345.2-201ENST00000606307 135 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AL132822.1-201ENST00000617063 513 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN4O00479 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGN4O00479 AC138627.2-201ENST00000624202 601 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 MTND5P11-201ENST00000511037 1812 ntBASIC0.42□□□□□ -2.34
HMGN4O00479 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
HMGN4O00479 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HMGN4O00479 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HMGN4O00479 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
HMGN4O00479 SRIP3-201ENST00000413200 219 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.41□□□□□ -2.34
HMGN4O00479 AL451054.2-201ENST00000420896 202 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AC007435.1-201ENST00000421086 415 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.41□□□□□ -2.34
HMGN4O00479 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGN4O00479 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN4O00479 RPL26P26-201ENST00000480251 434 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 RNA5SP290-201ENST00000517133 127 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AC109329.1-201ENST00000518744 317 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGN4O00479 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGN4O00479 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN4O00479 CLIC4P2-201ENST00000601934 717 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AC021171.1-201ENST00000603137 706 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 AL365204.3-201ENST00000612448 685 ntBASIC0.41□□□□□ -2.34
HMGN4O00479 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN4O00479 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 SNORA4.1-201ENST00000364263 144 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.4□□□□□ -2.35
HMGN4O00479 AL592310.1-201ENST00000414330 671 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AC019178.2-201ENST00000423595 505 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 ELOCP14-201ENST00000428070 331 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 RPS15AP9-201ENST00000439856 381 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 ELOCP7-201ENST00000439968 331 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN4O00479 RNU6-528P-201ENST00000516926 100 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 RNU6-840P-201ENST00000517275 65 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 CYCSP23-201ENST00000519781 313 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.4□□□□□ -2.35
HMGN4O00479 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.4□□□□□ -2.35
HMGN4O00479 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN4O00479 AC008088.1-201ENST00000580993 280 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 MTCO2P2-201ENST00000591258 225 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AC016727.2-201ENST00000603988 621 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AC004853.1-201ENST00000604902 698 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 AL583856.2-201ENST00000606298 543 ntBASIC0.4□□□□□ -2.35
HMGN4O00479 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN4O00479 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN4O00479 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
HMGN4O00479 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms