Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC090151.1-201ENST00000520784 730 ntBASIC4.05□□□□□ -1.76
RFXAPO00287 MTND6P33-201ENST00000571794 183 ntBASIC4.05□□□□□ -1.76
RFXAPO00287 U2.14-201ENST00000615943 113 ntBASIC4.05□□□□□ -1.76
RFXAPO00287 AC123768.4-201ENST00000616244 701 ntBASIC4.05□□□□□ -1.76
RFXAPO00287 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFXAPO00287 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RFXAPO00287 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFXAPO00287 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
RFXAPO00287 MARK2P15-201ENST00000432204 2186 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 ZNF962P-201ENST00000443465 3140 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 U3.26-201ENST00000391236 204 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AL591034.2-201ENST00000402839 359 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 MIR1251-201ENST00000408552 70 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 RPL7AP73-201ENST00000413490 353 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AC007098.1-201ENST00000420122 367 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.04□□□□□ -1.76
RFXAPO00287 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AC005326.1-201ENST00000429197 123 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.04□□□□□ -1.76
RFXAPO00287 GEMIN8P3-201ENST00000445417 720 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.04□□□□□ -1.76
RFXAPO00287 BX276092.4-201ENST00000452056 248 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 U8.22-201ENST00000459141 133 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.04□□□□□ -1.76
RFXAPO00287 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.04□□□□□ -1.76
RFXAPO00287 VWA8P1-201ENST00000510889 176 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 SNORA31.3-201ENST00000516029 96 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 HMGB1P14-201ENST00000557424 591 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.04□□□□□ -1.76
RFXAPO00287 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.04□□□□□ -1.76
RFXAPO00287 AC174048.1-201ENST00000603389 144 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
RFXAPO00287 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.04□□□□□ -1.76
RFXAPO00287 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RFXAPO00287 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFXAPO00287 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RFXAPO00287 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.03□□□□□ -1.76
RFXAPO00287 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RFXAPO00287 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFXAPO00287 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 Y_RNA.27-201ENST00000362540 103 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 SNORD81.1-201ENST00000363064 77 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 RNU6-704P-201ENST00000364162 103 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 Y_RNA.324-201ENST00000365165 102 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 SNORA48.5-201ENST00000391143 135 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AC063979.1-201ENST00000415539 377 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 RPS15AP6-201ENST00000420703 385 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AL513124.1-201ENST00000450410 614 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.03□□□□□ -1.76
RFXAPO00287 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.03□□□□□ -1.76
RFXAPO00287 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.03□□□□□ -1.76
RFXAPO00287 AC008489.1-201ENST00000524271 483 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 SYF2P1-201ENST00000550658 413 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.03□□□□□ -1.76
RFXAPO00287 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.03□□□□□ -1.76
RFXAPO00287 AC123786.2-201ENST00000603459 275 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.03□□□□□ -1.76
RFXAPO00287 AC034102.8-201ENST00000615146 484 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 MIR7154-201ENST00000620673 73 ntBASIC4.03□□□□□ -1.76
RFXAPO00287 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFXAPO00287 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFXAPO00287 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFXAPO00287 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RFXAPO00287 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFXAPO00287 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.02□□□□□ -1.77
RFXAPO00287 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFXAPO00287 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFXAPO00287 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.02□□□□□ -1.77
RFXAPO00287 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-858P-201ENST00000362436 107 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 SNORA38.1-201ENST00000364172 131 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-740P-201ENST00000364734 105 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-804P-201ENST00000384286 107 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-933P-201ENST00000384424 107 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 MIR521-1-201ENST00000384902 87 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 Y_RNA.581-201ENST00000391017 97 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-700P-201ENST00000391043 107 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 RNU6-651P-201ENST00000411040 105 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 AL445305.1-201ENST00000432577 575 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 AC004866.2-201ENST00000438285 481 ntBASIC4.02□□□□□ -1.77
RFXAPO00287 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms