Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MTCYBP1-201ENST00000454315 1119 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 BTF3P15-201ENST00000455606 336 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC010424.1-201ENST00000506336 297 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.3□□□□□ -2.04
PDLIM1O00151 RNU4-29P-201ENST00000515943 174 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AP001646.1-201ENST00000527936 915 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 OR5AL2P-201ENST00000532185 920 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC243972.3-201ENST00000539655 198 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.3□□□□□ -2.04
PDLIM1O00151 AC006362.1-201ENST00000567392 174 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 MIR4528-201ENST00000577763 90 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AL391813.1-201ENST00000603098 260 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC098614.4-201ENST00000607601 462 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC010678.1-201ENST00000614118 713 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 U6.42-201ENST00000618440 107 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC098657.3-201ENST00000620434 263 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC138649.3-201ENST00000622154 254 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 MTND4P27-201ENST00000450813 1354 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AL390237.1-201ENST00000404226 1415 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
PDLIM1O00151 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PDLIM1O00151 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDLIM1O00151 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 RNU6-456P-201ENST00000384493 107 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AL139039.1-201ENST00000401900 692 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 MTCO2P34-201ENST00000421994 607 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC133104.1-201ENST00000429100 218 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.29□□□□□ -2.04
PDLIM1O00151 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.29□□□□□ -2.04
PDLIM1O00151 MTCO1P19-201ENST00000443487 500 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.29□□□□□ -2.04
PDLIM1O00151 AC003071.1-201ENST00000451219 789 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 KLF3P2-201ENST00000465138 268 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.29□□□□□ -2.04
PDLIM1O00151 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.29□□□□□ -2.04
PDLIM1O00151 MTCO3P28-201ENST00000513351 515 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.29□□□□□ -2.04
PDLIM1O00151 AL356057.1-201ENST00000533798 831 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.29□□□□□ -2.04
PDLIM1O00151 AC008521.1-201ENST00000587471 187 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC091152.3-201ENST00000604227 325 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 RN7SKP299-201ENST00000606679 301 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC109347.2-201ENST00000610220 349 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC009090.3-201ENST00000616553 565 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 MIR6852-201ENST00000621699 66 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 AC093648.1-201ENST00000623546 606 ntBASIC2.29□□□□□ -2.04
PDLIM1O00151 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDLIM1O00151 SNORD62.1-201ENST00000362541 86 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 RNU6-1097P-201ENST00000363586 107 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 SNORA62.1-201ENST00000364287 154 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 Z98749.2-208ENST00000381646 500 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 RNU6-348P-201ENST00000384386 107 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 Y_RNA.576-201ENST00000384781 102 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 RPS4XP8-201ENST00000402039 771 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 RNU6-387P-201ENST00000411331 105 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.28□□□□□ -2.04
PDLIM1O00151 PTGES3P4-201ENST00000426243 356 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AL358934.1-201ENST00000432346 324 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.28□□□□□ -2.04
PDLIM1O00151 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AL031667.1-201ENST00000440222 725 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AL360221.1-201ENST00000445989 335 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AL583843.1-201ENST00000456070 346 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AL441985.1-201ENST00000457727 251 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AL121769.1-201ENST00000469473 401 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.28□□□□□ -2.04
PDLIM1O00151 FAM92A1P2-202ENST00000504766 877 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.28□□□□□ -2.04
PDLIM1O00151 AC116655.1-201ENST00000508324 901 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC104806.1-201ENST00000508720 308 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.28□□□□□ -2.04
PDLIM1O00151 MIR548AC-201ENST00000585049 88 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AL589743.7-201ENST00000612637 233 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 MIR6134-201ENST00000617606 109 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 uc_338.20-201ENST00000621563 178 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC092608.2-201ENST00000624427 218 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 AC090582.1-201ENST00000636321 199 ntBASIC2.28□□□□□ -2.04
PDLIM1O00151 MTND5P17-201ENST00000418405 1603 ntBASIC2.28□□□□□ -2.05
PDLIM1O00151 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.27□□□□□ -2.05
PDLIM1O00151 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM1O00151 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 RNU6-181P-201ENST00000363225 107 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 SNORD115-7-201ENST00000365306 82 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 RNU6-282P-201ENST00000365357 103 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 Y_RNA.367-201ENST00000365544 101 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms