Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC107871.2-201ENST00000612894 502 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MIR6863-201ENST00000636112 90 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU6-858P-201ENST00000362436 107 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 SNORD14B-201ENST00000364533 90 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU6-384P-201ENST00000364900 104 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU6-45P-201ENST00000384471 107 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 Y_RNA.517-201ENST00000384551 106 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU4-46P-201ENST00000410818 138 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AL096701.2-201ENST00000416920 238 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 MTCYBP8-201ENST00000422855 651 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC004383.1-201ENST00000438135 289 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 NDUFB1P2-201ENST00000449477 176 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AL356010.1-201ENST00000456364 102 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU7-63P-201ENST00000459054 62 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC107401.1-201ENST00000503426 685 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 MTND2P33-201ENST00000506452 1031 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC114781.4-201ENST00000513707 639 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC105417.1-201ENST00000514691 285 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU1-86P-201ENST00000516108 154 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RNU1-107P-201ENST00000516617 154 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 AL354950.2-201ENST00000617939 290 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 uc_338.11-201ENST00000619132 160 ntBASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
NPIPA3F8WFD2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 MIR34A-201ENST00000385130 110 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL133475.1-201ENST00000404414 305 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL513475.1-201ENST00000406602 315 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 FTH1P15-201ENST00000406984 280 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL139413.1-201ENST00000421309 217 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL589823.1-201ENST00000429577 183 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 Z98742.2-201ENST00000431564 187 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 VN1R108P-201ENST00000431580 830 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC027673.1-201ENST00000456245 405 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AL441985.1-201ENST00000457727 251 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AP001324.2-201ENST00000461163 319 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC003982.1-202ENST00000469928 248 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 HMGB1P30-201ENST00000492455 606 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC104136.1-201ENST00000512969 394 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 MIR892C-201ENST00000516410 77 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 RNU6-826P-201ENST00000516827 104 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC245505.1-201ENST00000556398 224 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 MIR3117-201ENST00000584034 78 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC012119.1-201ENST00000603184 222 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC139792.3-201ENST00000623525 224 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 CR381653.2-201ENST00000624041 768 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 AC005609.4-201ENST00000625071 447 ntBASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA3F8WFD2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RNU6-461P-201ENST00000364195 107 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RNU6-301P-201ENST00000384277 107 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RNU6-1158P-201ENST00000391167 107 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RPS4XP7-201ENST00000406274 780 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 SNORD88.1-201ENST00000408684 91 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RNU2-29P-201ENST00000410423 189 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RNA5SP21-201ENST00000410917 96 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms