Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF223E7ERA6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF223E7ERA6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF223E7ERA6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF223E7ERA6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 RNU1-146P-201ENST00000364015 165 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 RNU6-335P-201ENST00000364563 113 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC016397.1-201ENST00000412463 242 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC008134.1-201ENST00000420943 193 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 CRIP1P1-201ENST00000427567 185 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AL121890.1-201ENST00000435457 205 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC009220.1-201ENST00000451614 275 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AZGP1P2-201ENST00000454506 345 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC009127.1-201ENST00000467090 155 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC022137.1-201ENST00000483735 151 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 RPS27AP10-201ENST00000496103 208 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 RN7SKP21-201ENST00000516503 220 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 RNU6-126P-201ENST00000516685 103 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 ACA59.2-201ENST00000517061 156 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 RNA5SP490-201ENST00000517141 136 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC141557.1-201ENST00000540982 400 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 MIR6810-201ENST00000622701 70 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AL139811.1-201ENST00000424779 2299 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 AP005432.1-201ENST00000580891 3485 ntBASIC4.53□□□□□ -1.68
RNF223E7ERA6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF223E7ERA6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF223E7ERA6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 RNU6-249P-201ENST00000363016 102 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 RNA5SP91-201ENST00000390902 119 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 AL355796.1-201ENST00000406706 323 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 TMEM183AP1-205ENST00000432739 290 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 HMGN2P10-201ENST00000448085 265 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 RPL39P39-201ENST00000455840 151 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 RNU6-893P-201ENST00000458841 100 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 MIR4330-201ENST00000579077 105 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 RNA5SP108-201ENST00000605921 117 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF223E7ERA6 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
RNF223E7ERA6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF223E7ERA6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF223E7ERA6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF223E7ERA6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 MIR133A2-201ENST00000347538 102 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 Y_RNA.107-201ENST00000363190 121 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 RNA5SP123-201ENST00000363244 119 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 Y_RNA.198-201ENST00000364013 98 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 Y_RNA.366-201ENST00000365540 102 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 MIR141-201ENST00000384975 95 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 RNU6-1197P-201ENST00000391183 107 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 MIR1185-2-201ENST00000408687 86 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 RNA5SP487-201ENST00000410186 122 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF223E7ERA6 RPS26P55-201ENST00000471178 356 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 AC007751.1-201ENST00000529260 376 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 AC105137.2-201ENST00000569073 466 ntBASIC4.51□□□□□ -1.69
RNF223E7ERA6 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms