Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AC117525.1-201ENST00000515228 503 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 CR383656.7-201ENST00000548164 174 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 SUB1P4-201ENST00000566062 339 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AL078603.1-201ENST00000603824 313 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AC112220.3-201ENST00000605502 502 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AF129408.1-201ENST00000608767 431 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 MTND1P37-201ENST00000636562 264 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 RNU6-414P-201ENST00000363705 104 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 RNU6-152P-201ENST00000384037 107 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 MRPL35P1-201ENST00000404272 572 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 RNA5SP193-201ENST00000410353 107 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 NCOR1P3-201ENST00000420479 303 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 JTBP1-201ENST00000441314 247 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 MTND1P33-201ENST00000446251 917 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 HMGN3P1-201ENST00000453847 193 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 RPL26P26-201ENST00000480251 434 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC002350.1-201ENST00000490759 375 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC087897.1-201ENST00000550134 156 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AL512310.8-201ENST00000550183 120 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AP003465.2-201ENST00000602571 373 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 MZT1P2-201ENST00000604387 248 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AC105129.3-201ENST00000605455 485 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AL022345.1-201ENST00000607292 135 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 AL109620.1-201ENST00000618738 1197 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.2□□□□□ -2.38
CPSF4LA6NMK7 RNU5E-1-201ENST00000362477 120 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 RNU6-778P-201ENST00000363269 103 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC127391.1-201ENST00000411737 98 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC007919.1-201ENST00000429380 217 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 KATNBL1P3-201ENST00000443475 909 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AL163195.1-201ENST00000496941 348 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 SUMO1P1-201ENST00000497904 306 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 PDCD5P2-201ENST00000507570 312 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 SNORD116-30-201ENST00000516468 85 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 RNA5SP490-201ENST00000517141 136 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 HIGD1AP6-201ENST00000521833 279 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 LSM6P2-201ENST00000552208 177 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC015688.6-201ENST00000577737 104 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 MIR3167-201ENST00000579623 85 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 Z82243.1-201ENST00000609432 473 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC016252.1-201ENST00000609721 474 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC092608.3-201ENST00000625017 386 ntBASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CPSF4LA6NMK7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 CETN4P-201ENST00000432407 469 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 MTCO3P5-201ENST00000433620 714 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC245102.2-201ENST00000448956 180 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC013267.1-201ENST00000458227 267 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 RPL36AP48-201ENST00000485521 314 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 TRBVA-201ENST00000498804 316 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 PTP4A1P4-201ENST00000512479 322 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC079598.5-201ENST00000547460 117 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC004217.3-201ENST00000551552 878 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 CLIC4P2-201ENST00000601934 717 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AL031176.1-201ENST00000604554 466 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AP001596.2-201ENST00000608410 312 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AP003400.6-201ENST00000624698 740 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 AC068205.3-201ENST00000636385 468 ntBASIC0.18□□□□□ -2.38
CPSF4LA6NMK7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 RNU6-543P-201ENST00000362576 108 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 RNU2-15P-201ENST00000410692 191 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL161935.2-201ENST00000414627 60 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL353621.1-201ENST00000418219 243 ntBASIC0.17□□□□□ -2.38
CPSF4LA6NMK7 AL353706.1-201ENST00000436728 494 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms