Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AL133396.1-201ENST00000432048 687 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 RPS15AP10-201ENST00000432472 382 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 SETP5-201ENST00000437270 562 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 SSXP4-201ENST00000451349 245 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC128713.1-201ENST00000471495 306 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC097473.1-201ENST00000508142 408 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.670-201ENST00000516255 105 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 SNORA70.18-201ENST00000516696 98 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AP004607.1-201ENST00000524456 203 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC080078.3-201ENST00000605407 463 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AL121917.1-203ENST00000605534 577 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AL080274.1-201ENST00000605565 220 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC073308.1-201ENST00000623696 305 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC018692.3-201ENST00000623929 123 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 AC110491.1-201ENST00000562191 2010 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.146-201ENST00000363549 102 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 RNU1-140P-201ENST00000365040 165 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 SNORA44-201ENST00000384584 132 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 MIR517A-201ENST00000385001 87 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 RPS29P13-201ENST00000402041 169 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AL138885.1-201ENST00000405921 675 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.646-201ENST00000410980 101 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 RNA5SP508-201ENST00000411327 119 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AL714022.1-201ENST00000439897 151 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 MRPS31P2-201ENST00000451581 518 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 MTCO3P10-201ENST00000455912 772 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC006026.2-201ENST00000457376 180 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 RPL26P9-201ENST00000457466 433 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AL591473.1-201ENST00000464297 313 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC027575.1-201ENST00000481064 460 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC020661.2-201ENST00000560114 134 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 VN1R107P-201ENST00000601784 209 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC009229.3-201ENST00000608056 282 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC005046.1-201ENST00000608515 625 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC019193.3-201ENST00000609144 554 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC068831.7-201ENST00000616954 363 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 AC244517.12-201ENST00000623581 663 ntBASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC85CA6NKD9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 RNU6-78P-201ENST00000362897 107 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.128-201ENST00000363391 112 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 SNORA63-201ENST00000363450 132 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 RNU6-306P-201ENST00000384617 107 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 MIR504-201ENST00000385065 83 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 RNA5SP38-201ENST00000410750 119 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC093151.1-201ENST00000427711 313 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 USP9YP30-201ENST00000430729 455 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 PCMTD1P1-201ENST00000455560 355 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 BTF3P15-201ENST00000455606 336 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 PTP4A1P4-201ENST00000512479 322 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC093303.1-201ENST00000514549 295 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC005476.1-201ENST00000554427 397 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 RPL21P7-201ENST00000557463 483 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC024153.1-201ENST00000603103 365 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 AC009314.1-201ENST00000603871 304 ntBASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC85CA6NKD9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 AP001148.1-201ENST00000624124 2359 ntBASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC85CA6NKD9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms