Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC114781.4-201ENST00000513707 639 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 RNU6-864P-201ENST00000516256 108 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 RNU7-30P-201ENST00000516835 62 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 AP002404.1-201ENST00000532005 451 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 UBL5P2-201ENST00000583788 219 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 AC091135.1-201ENST00000585943 307 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 AL645944.1-201ENST00000603857 493 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 APOOP1-201ENST00000604695 592 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 LARP7P1-201ENST00000605576 316 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 AL357078.3-201ENST00000607528 618 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 AL133216.2-202ENST00000634512 349 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TBC1D3FA6NER0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC138393.1-203ENST00000327086 343 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 U3.26-201ENST00000391236 204 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RN7SKP32-201ENST00000410167 303 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RNA5SP31-201ENST00000411144 127 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 HMGN2P20-201ENST00000437531 273 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC098831.1-201ENST00000440661 216 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC010401.1-201ENST00000463867 348 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC079140.5-201ENST00000507882 310 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RNU6-323P-201ENST00000521915 107 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AP000889.1-201ENST00000530968 660 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 MIR3672-201ENST00000584290 82 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TBC1D3FA6NER0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 RNU1-75P-201ENST00000347264 129 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 MIR518D-201ENST00000385014 87 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 VN1R36P-201ENST00000414936 291 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 HMGB1P9-201ENST00000429856 646 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 SNRPEP8-201ENST00000442866 260 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 RNU6-256P-201ENST00000516747 97 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AP000889.2-201ENST00000532684 490 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AC005498.1-201ENST00000592125 465 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 NUTF2P8-201ENST00000604593 363 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 Y_RNA.804-201ENST00000615262 101 ntBASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TBC1D3FA6NER0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 RNU1-140P-201ENST00000365040 165 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 RNU6-1009P-201ENST00000390996 107 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AL356432.1-201ENST00000405809 419 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms