Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 USP9YP24-201ENST00000434374 697 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 NEFMP1-201ENST00000443423 1006 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AL358794.1-201ENST00000445689 381 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 RPS3AP22-201ENST00000488297 769 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC010587.2-201ENST00000511727 448 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 RN7SKP219-201ENST00000516825 296 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 SNORA44.1-201ENST00000517031 108 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 SNORA31.19-201ENST00000517079 126 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 PSMA3P-201ENST00000555485 635 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 MIR4782-201ENST00000577987 79 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC107952.2-201ENST00000606048 486 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC017037.3-201ENST00000625016 472 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC092192.1-201ENST00000633154 1018 ntBASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV41A0A0B4J266 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RNU5E-10P-201ENST00000363506 118 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RNU1-42P-201ENST00000364033 160 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 SNORA75B-201ENST00000384053 137 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 Y_RNA.534-201ENST00000384599 112 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-1000P-201ENST00000391066 106 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 SNORA40C-201ENST00000391285 128 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 FTH1P15-201ENST00000406984 280 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 MIR1323-201ENST00000408090 73 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 PIGPP2-201ENST00000411569 458 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 POLHP1-201ENST00000411806 470 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RPS12P24-201ENST00000412619 387 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC008267.5-201ENST00000424928 265 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 EEF1A1P39-201ENST00000440791 250 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL360221.1-201ENST00000445989 335 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RPL39P36-201ENST00000490784 156 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC096745.1-201ENST00000509945 370 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC117532.1-201ENST00000514638 323 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 MTND1P36-201ENST00000522384 936 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AP000907.2-201ENST00000530827 353 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 RPS3AP4-201ENST00000555161 764 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC015720.1-201ENST00000565251 277 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC025678.1-201ENST00000567861 338 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC103987.3-201ENST00000582071 292 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 MIR544B-201ENST00000582372 78 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL670379.10-201ENST00000604330 253 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL670379.9-201ENST00000605428 253 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC112220.3-201ENST00000605502 502 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AL359314.1-201ENST00000616913 261 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AC099842.1-201ENST00000619919 596 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 AP000776.1-201ENST00000530032 1663 ntBASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV41A0A0B4J266 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-457P-201ENST00000363999 107 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-166P-201ENST00000384371 107 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-817P-201ENST00000391083 104 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 MIR1283-2-201ENST00000408621 87 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU2-48P-201ENST00000410694 191 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 MTATP6P20-201ENST00000414147 562 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC009310.1-201ENST00000414414 451 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 MTND4P25-201ENST00000441039 533 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms