Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 RNU6-390P-201ENST00000516259 103 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 Y_RNA.676-201ENST00000516393 96 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC023825.1-201ENST00000566704 1030 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AL356094.1-201ENST00000624663 1212 ntBASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV3A0A0B4J244 AC091812.1-201ENST00000432235 1948 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 RNU6-1010P-201ENST00000362757 107 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 SNORA7.1-201ENST00000363750 139 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 MIR150-201ENST00000385048 84 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 RPL17P35-201ENST00000432217 549 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 MTND4P15-201ENST00000437913 1033 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC245102.2-201ENST00000448956 180 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 RNU6-586P-201ENST00000517265 104 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC021451.1-201ENST00000523498 1129 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC018630.3-201ENST00000542637 96 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC084364.2-201ENST00000546924 395 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 MIR4782-201ENST00000577987 79 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 MIR4421-201ENST00000578133 69 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 RPL30P11-203ENST00000598995 310 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 CLIC4P2-201ENST00000601934 717 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.6-201ENST00000603753 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.11-201ENST00000604059 253 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC008162.1-201ENST00000604718 254 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.1-201ENST00000604752 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.2-201ENST00000604983 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.5-201ENST00000605253 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.4-201ENST00000605279 254 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.12-201ENST00000605291 253 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.8-201ENST00000605353 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL359821.1-201ENST00000605519 182 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 PRR13P7-201ENST00000605538 430 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL670379.7-201ENST00000605823 252 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC096772.1-201ENST00000609146 564 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AL157834.3-201ENST00000615543 103 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC231657.1-201ENST00000624313 397 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC006927.2-201ENST00000639256 389 ntBASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV3A0A0B4J244 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AP000560.1-201ENST00000624150 1937 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNU1-58P-201ENST00000362413 163 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNU5B-4P-201ENST00000363508 111 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 SNORD26-201ENST00000384147 75 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 SNORD14D-201ENST00000384390 87 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 SNORA48.1-201ENST00000390879 135 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 BTF3L4P2-201ENST00000392798 346 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 MTND3P20-201ENST00000407663 186 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AL590084.1-201ENST00000407885 387 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNA5SP100-201ENST00000410903 110 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNA5SP59-201ENST00000410922 110 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC004965.1-201ENST00000413033 213 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 SRIP3-201ENST00000413200 219 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 TIMM9P2-201ENST00000419324 266 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC104651.1-201ENST00000427559 735 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 ELOCP30-201ENST00000447108 299 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 PRELID3BP1-201ENST00000457142 540 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNU7-95P-201ENST00000459222 64 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC108078.2-201ENST00000510750 236 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 TRMT112P2-201ENST00000512910 132 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 MTCYBP43-201ENST00000513621 740 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-334P-201ENST00000517072 102 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC005832.3-201ENST00000537929 631 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AP000763.2-201ENST00000540641 163 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 MIR4293-201ENST00000584305 78 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC004987.4-201ENST00000603383 338 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 AC090186.1-201ENST00000605991 572 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.96□□□□□ -2.26
TRAV3A0A0B4J244 U6.99-201ENST00000637524 83 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms