Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 KATNBL1P6-201ENST00000453433 915 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 FO393415.2-201ENST00000480085 343 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AP004607.1-201ENST00000524456 203 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AC009977.1-201ENST00000586015 570 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 ELOCP5-201ENST00000604924 333 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 RNU6-91P-201ENST00000607774 107 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 MIR6845-201ENST00000613182 61 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AL512643.1-201ENST00000635735 524 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 ZNF876P-202ENST00000398732 1485 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 RNU5E-1-201ENST00000362477 120 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 SNORD115-3-201ENST00000363100 82 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 RNU5A-8P-201ENST00000364102 114 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 VN1R36P-201ENST00000414936 291 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL445669.1-201ENST00000426743 755 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 USP9YP24-201ENST00000434374 697 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AP000949.1-201ENST00000438328 629 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AC108059.3-201ENST00000456388 214 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 RPL23AP63-201ENST00000498752 471 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 SNORA31.19-201ENST00000517079 126 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 DUXAP5-201ENST00000529668 529 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 RPL30P11-203ENST00000598995 310 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL078605.1-201ENST00000603529 500 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL358072.1-201ENST00000604156 575 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AC007363.1-201ENST00000604736 620 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.54□□□□□ -2.16
USH1CQ9Y6N9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 Y_RNA.465-201ENST00000384293 102 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 MIR518D-201ENST00000385014 87 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 RNU6-817P-201ENST00000391083 104 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 ERHP2-201ENST00000402323 299 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 OR9R1P-201ENST00000412200 877 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 RPS12P24-201ENST00000412619 387 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC074117.2-201ENST00000417130 397 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 VPS26BP1-201ENST00000417155 755 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 RPL7P43-201ENST00000478876 753 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC104564.1-201ENST00000493028 407 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 FAM92A1P2-202ENST00000504766 877 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 MTCYBP43-201ENST00000513621 740 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 RN7SKP219-201ENST00000516825 296 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 RNU6-667P-201ENST00000517186 102 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC091163.3-201ENST00000518269 1144 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 MTND1P36-201ENST00000522384 936 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 SNRPGP17-201ENST00000603780 214 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 SEPT7P9-203ENST00000604116 343 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 AC096772.1-201ENST00000609146 564 ntBASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
USH1CQ9Y6N9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNU1-62P-201ENST00000362599 164 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 SNORD114-19-201ENST00000363072 75 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 FTH1P15-201ENST00000406984 280 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC019070.1-201ENST00000415008 1024 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC138623.1-201ENST00000418060 216 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 BX510359.4-201ENST00000423750 193 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AL078601.1-201ENST00000444542 271 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNU6-953P-201ENST00000459154 107 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC006512.1-201ENST00000468816 291 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC021146.2-201ENST00000504736 556 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNA5SP458-201ENST00000516188 119 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms