Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 Z98749.2-208ENST00000381646 500 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 RPL5P18-201ENST00000406671 891 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 MTCO2P27-201ENST00000420740 428 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AL590632.1-201ENST00000424289 371 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 RPL37P4-201ENST00000448908 268 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 RPL30P14-201ENST00000482744 348 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 SLC25A15P5-201ENST00000508033 253 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 RN7SKP18-201ENST00000516005 275 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC074050.1-201ENST00000563247 211 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 MIR3158-1-201ENST00000583596 81 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 ELOCP5-201ENST00000604924 333 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC123912.5-201ENST00000605470 343 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AL133255.1-201ENST00000606374 441 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AC098657.3-201ENST00000620434 263 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AL359757.2-201ENST00000624309 274 ntBASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 MTND5P7-201ENST00000413558 1798 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-37P-201ENST00000362692 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-11P-201ENST00000364234 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-7-201ENST00000364784 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-8-201ENST00000365467 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-25P-201ENST00000383873 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-1-201ENST00000383898 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-48P-201ENST00000384161 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-36P-201ENST00000384172 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-4P-201ENST00000384205 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-5P-201ENST00000384238 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-3P-201ENST00000384314 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-16P-201ENST00000384385 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-15P-201ENST00000384534 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-2-201ENST00000384627 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-29P-201ENST00000384637 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-1011P-201ENST00000384668 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-9-201ENST00000384776 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-33P-201ENST00000384793 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 MIR200C-201ENST00000384980 68 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 SNORD56-201ENST00000413522 71 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC018644.1-201ENST00000429934 551 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AL159987.2-201ENST00000432754 307 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 SSXP4-201ENST00000451349 245 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 Y_RNA.701-201ENST00000516812 110 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 Y_RNA.718-201ENST00000517110 102 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 NACAP3-201ENST00000552100 481 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC008962.1-201ENST00000605729 304 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-6P-201ENST00000606623 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 MIR92B-201ENST00000607575 96 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC126177.8-201ENST00000618339 1015 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 CR392039.5-201ENST00000623201 510 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AL136164.4-201ENST00000625013 2135 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AC073476.4-201ENST00000628409 72 ntBASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHA3Q9Y5H8 SNORD62.1-201ENST00000362541 86 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 RNA5SP295-201ENST00000362655 121 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 Y_RNA.259-201ENST00000364619 101 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 Y_RNA.315-201ENST00000365117 102 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-658P-201ENST00000384606 106 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 SNORD73A-201ENST00000386062 65 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-293P-201ENST00000411259 106 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 AF228730.4-201ENST00000421457 183 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 AC098831.1-201ENST00000440661 216 ntBASIC3.53□□□□□ -1.84
PCDHA3Q9Y5H8 AL133547.1-201ENST00000448546 220 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms