Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC116337.1-201ENST00000509680 687 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RN7SKP18-201ENST00000516005 275 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-559P-201ENST00000516151 98 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC007991.1-201ENST00000522680 631 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 GLYCAM1-201ENST00000546596 285 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC021739.1-201ENST00000559631 174 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 ELOCP5-201ENST00000604924 333 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 MTND4LP5-201ENST00000605152 292 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC016727.1-205ENST00000605437 569 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 U3.45-201ENST00000607547 219 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 CDC27P3-201ENST00000635418 1910 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-898P-201ENST00000365627 104 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR518D-201ENST00000385014 87 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AC093151.1-201ENST00000427711 313 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 CYCSP32-201ENST00000440548 321 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AL031274.1-201ENST00000450334 232 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 HMGN2P13-201ENST00000476476 274 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 SMURF2P1-201ENST00000514992 481 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AL163153.1-201ENST00000554223 283 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 VN1R107P-201ENST00000601784 209 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AL160281.1-201ENST00000605307 311 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 PLCE1P1-201ENST00000622094 305 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 U4.7-201ENST00000638126 106 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA3Q9Y5H0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-933P-201ENST00000384424 107 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-601P-201ENST00000384540 107 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 MTCYBP4-201ENST00000401524 249 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RPS3AP12-201ENST00000443616 753 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC092001.1-201ENST00000453012 261 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC013470.1-201ENST00000453438 462 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 snoU109.2-201ENST00000459316 135 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 U8.21-201ENST00000459536 136 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 HMGN1P13-201ENST00000505795 138 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORD59.2-201ENST00000516873 68 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORD19.2-201ENST00000516978 73 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORA31.21-201ENST00000517180 77 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-711P-201ENST00000517255 106 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL670379.10-201ENST00000604330 253 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AL670379.9-201ENST00000605428 253 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC123912.5-201ENST00000605470 343 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU1-30P-201ENST00000606575 163 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC096577.2-201ENST00000611455 153 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC133104.2-201ENST00000615272 193 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR6128-201ENST00000615528 109 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AC244517.12-201ENST00000623581 663 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 U6.105-201ENST00000637379 88 ntBASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA3Q9Y5H0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms