Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 AC007012.1-201ENST00000567192 175 ntBASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 SNORD11B-201ENST00000607707 90 ntBASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR8080-201ENST00000622224 89 ntBASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 U6.115-201ENST00000636045 103 ntBASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA4Q9Y5G9 AC106871.1-201ENST00000568324 3102 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 TLK1P1-201ENST00000456760 2440 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC006206.1-201ENST00000544842 3387 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP507-201ENST00000363603 121 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP125-201ENST00000364843 120 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 SNORD87-201ENST00000364849 89 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-140P-201ENST00000384566 108 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 Y_RNA.587-201ENST00000391210 103 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AL645927.1-201ENST00000396783 406 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RN7SKP100-201ENST00000411258 284 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 GPS2P1-201ENST00000411761 986 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC117454.1-201ENST00000491120 168 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC008953.1-201ENST00000497334 318 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP464-201ENST00000516251 108 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC025647.1-201ENST00000517879 253 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AL160236.1-201ENST00000556317 195 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RMST_8.1-201ENST00000610287 165 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR6748-201ENST00000610433 71 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 RPSAP73-201ENST00000614820 330 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AL034549.2-201ENST00000618285 3373 ntBASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGA4Q9Y5G9 AL022311.1-201ENST00000623726 19416 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-508P-201ENST00000363231 103 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 Y_RNA.220-201ENST00000364244 109 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 Y_RNA.432-201ENST00000384087 111 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU1-136P-201ENST00000384181 164 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-1152P-201ENST00000384576 107 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR29B2-201ENST00000385055 81 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AC009804.1-201ENST00000400949 179 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU2-55P-201ENST00000411146 174 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 Y_RNA.625-201ENST00000411256 107 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AL139148.1-201ENST00000427122 680 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 RN7SL583P-201ENST00000475692 287 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 SNORD116-26-201ENST00000516006 96 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AL161713.1-201ENST00000555538 145 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AL137843.1-201ENST00000605078 385 ntBASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA4Q9Y5G9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 ADAM5-202ENST00000399789 1942 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR223-201ENST00000385204 110 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-440P-201ENST00000390882 105 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 RPL23AP27-201ENST00000415161 451 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 RN7SL172P-201ENST00000460535 303 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-344P-201ENST00000516635 111 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 AL021997.2-201ENST00000615674 271 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 AC068205.3-201ENST00000636385 468 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 U2.21-201ENST00000637295 81 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA4Q9Y5G9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms