Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PSMA3P-201ENST00000555485 635 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AL121821.2-201ENST00000556081 394 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 MTND5P11-201ENST00000511037 1812 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 MTCO1P23-201ENST00000415223 1526 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 ENSAP3-201ENST00000312710 333 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 RNU6-611P-201ENST00000384276 104 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 MIR520E-201ENST00000384867 87 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.37□□□□□ -2.35
AP4S1Q9Y587 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.37□□□□□ -2.35
AP4S1Q9Y587 SNRPEP9-201ENST00000436794 238 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 AC011005.2-201ENST00000487324 359 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 HSPE1P4-201ENST00000550617 308 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 AP003465.2-201ENST00000602571 373 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 Z82243.1-201ENST00000609432 473 ntBASIC0.37□□□□□ -2.35
AP4S1Q9Y587 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.37□□□□□ -2.35
AP4S1Q9Y587 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
AP4S1Q9Y587 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.36□□□□□ -2.35
AP4S1Q9Y587 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC132479.1-201ENST00000449160 144 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC034244.1-201ENST00000507687 207 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC108078.2-201ENST00000510750 236 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 RNA5SP384-201ENST00000516615 116 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AL512310.8-201ENST00000550183 120 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC005951.2-201ENST00000576282 495 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC008751.2-201ENST00000597885 980 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC079610.2-201ENST00000604818 690 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AL132822.1-201ENST00000617063 513 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC068205.3-201ENST00000636385 468 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC009950.2-201ENST00000636548 183 ntBASIC0.36□□□□□ -2.35
AP4S1Q9Y587 AC233981.2-201ENST00000611524 1614 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC100821.1-201ENST00000523153 2479 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 RPL26P27-201ENST00000414397 437 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 PSMA6P3-201ENST00000428242 164 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 USP9YP34-201ENST00000453983 808 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC013267.1-201ENST00000458227 267 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 HMGN1P13-201ENST00000505795 138 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AP000763.2-201ENST00000540641 163 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC008015.1-201ENST00000555505 465 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 CYP3A137P-201ENST00000562436 69 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AL583856.2-201ENST00000606298 543 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 AC011939.3-201ENST00000613686 466 ntBASIC0.35□□□□□ -2.35
AP4S1Q9Y587 Y_RNA.595-201ENST00000410403 105 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 CBX3P6-201ENST00000430257 527 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 OR9N1P-202ENST00000494289 481 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 PDCD5P2-201ENST00000507570 312 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC015688.6-201ENST00000577737 104 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC005786.1-201ENST00000588553 154 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 BNIP3P16-201ENST00000589779 534 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC004805.2-201ENST00000605382 482 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
AP4S1Q9Y587 RNU6-112P-201ENST00000363599 104 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
AP4S1Q9Y587 MIR1302-8-201ENST00000408342 128 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.33□□□□□ -2.36
AP4S1Q9Y587 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.33□□□□□ -2.36
AP4S1Q9Y587 FAM204CP-201ENST00000424489 642 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 CETN4P-201ENST00000432407 469 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 UBE2V1P8-201ENST00000437166 265 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 Z73417.1-201ENST00000447373 778 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 RPL30P1-201ENST00000488676 339 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC005840.1-201ENST00000498412 377 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC074344.1-201ENST00000512823 224 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC108729.3-201ENST00000513484 108 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC027104.1-201ENST00000563702 681 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms