Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AL391261.4-201ENST00000616012 481 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 U6.106-201ENST00000636360 105 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 OR14L1P-202ENST00000641545 3009 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 Y_RNA.170-201ENST00000363746 110 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 Y_RNA.569-201ENST00000384749 103 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 MIR153-2-201ENST00000385225 87 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 MIR613-201ENST00000385248 95 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AL035079.1-201ENST00000405210 287 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 SNRPEP9-201ENST00000436794 238 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 RPS29P7-201ENST00000439662 171 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AC006026.2-201ENST00000457376 180 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 RPS29P26-201ENST00000477483 171 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 SNORA43.2-201ENST00000516652 128 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-703P-201ENST00000516946 107 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 SNRPGP15-201ENST00000600149 222 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AC015914.2-201ENST00000618167 288 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AC021753.1-201ENST00000635724 168 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 AC241585.2-209ENST00000638217 143 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 HAUS6P2-201ENST00000433254 2404 ntBASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.78□□□□□ -1.64
HCN4Q9Y3Q4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-879P-201ENST00000364328 108 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.286-201ENST00000364813 102 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 SNORD50.2-201ENST00000365465 70 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-47P-201ENST00000383866 107 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-926P-201ENST00000384075 107 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 MIR32-201ENST00000384965 70 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AC011742.1-201ENST00000431448 434 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL162151.2-201ENST00000448875 158 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RN7SL98P-201ENST00000462271 300 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RPL30P1-201ENST00000488676 339 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RN7SL441P-201ENST00000492388 296 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 SNORD116-28-201ENST00000516123 91 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 SNORA70.16-201ENST00000516390 95 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 RPL21P7-201ENST00000557463 483 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL590240.4-201ENST00000616908 390 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 LINC00901.1-201ENST00000617252 152 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL359854.1-201ENST00000614203 1594 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 AL353743.1-202ENST00000431724 1695 ntBASIC4.77□□□□□ -1.65
HCN4Q9Y3Q4 LINC01355-201ENST00000566551 5444 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 AC118273.1-201ENST00000525324 3006 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.82-201ENST00000363000 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.92-201ENST00000363043 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-527P-201ENST00000363425 104 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.235-201ENST00000364412 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.275-201ENST00000364726 110 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.306-201ENST00000365015 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.312-201ENST00000365089 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.322-201ENST00000365151 102 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 U3.32-201ENST00000408116 212 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 SNORD12B-201ENST00000410433 91 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 COX6CP13-201ENST00000428703 226 ntBASIC4.76□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.650-201ENST00000459002 102 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms