Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC125238.1-201ENST00000448842 249 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RPL21P99-201ENST00000480369 423 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 MTCYBP18-201ENST00000501056 747 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC138761.3-201ENST00000579993 334 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC005730.3-201ENST00000583067 366 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RPL23AP78-201ENST00000599928 470 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AL035413.2-201ENST00000604801 525 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC092794.2-201ENST00000620933 563 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 RNU5E-4P-201ENST00000364931 120 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AL592114.1-201ENST00000403842 483 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AL078595.1-201ENST00000404458 226 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 RNA5SP293-201ENST00000410527 113 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AC098614.3-201ENST00000438957 440 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.702-201ENST00000516843 96 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 SCARNA20.6-201ENST00000517251 106 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AC018638.8-201ENST00000588755 281 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AC116312.1-201ENST00000606841 314 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 AL591516.1-201ENST00000611326 274 ntBASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK11AQ9UQ88 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 RNU6-38P-201ENST00000384085 107 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 MIR514A2-201ENST00000385131 88 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 MIR514A3-201ENST00000385132 88 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 RNU6-332P-201ENST00000391193 108 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 RNU4-26P-201ENST00000410270 107 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 HMGN2P30-201ENST00000423237 256 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AL714022.1-201ENST00000439897 151 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 RNU6-333P-201ENST00000459117 107 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC098799.2-201ENST00000509466 868 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 LRRC34P2-201ENST00000514850 553 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 MIR4424-201ENST00000585257 86 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC011712.1-201ENST00000588959 234 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC098826.3-201ENST00000603823 466 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 RNU6-89P-201ENST00000606519 100 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC090617.7-201ENST00000623952 126 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AL136360.1-201ENST00000503377 1900 ntBASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDK11AQ9UQ88 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 MIR301A-201ENST00000385261 86 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 RN7SKP284-201ENST00000411002 343 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AL160275.3-201ENST00000423876 471 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC010486.1-201ENST00000511793 424 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 RNU6-914P-201ENST00000516749 109 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC078814.3-201ENST00000553036 491 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 MIR15A-201ENST00000607334 83 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC025253.1-201ENST00000613623 543 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC063943.3-201ENST00000615562 356 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 AC100810.6-201ENST00000638068 285 ntBASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDK11AQ9UQ88 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.245-201ENST00000364493 95 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AC245291.1-201ENST00000419501 328 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AC063976.3-201ENST00000426849 329 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 HMGN1P18-201ENST00000457642 277 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 SCARNA18-201ENST00000459004 134 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 RNA5SP290-201ENST00000517133 127 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 AC010653.1-201ENST00000571108 881 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms