Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP25Q9UHP3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNU6-198P-201ENST00000384258 104 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNA5SP219-201ENST00000390940 113 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 SNORA16.2-201ENST00000390991 127 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 AL360182.1-201ENST00000397433 468 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 MIR888-201ENST00000401186 77 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 MIR548P-201ENST00000408336 84 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNU4-14P-201ENST00000410858 122 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 MTND1P17-201ENST00000448961 204 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 MTND5P5-201ENST00000503764 376 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNU1-95P-201ENST00000516357 160 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNU1-128P-201ENST00000516704 160 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 RNA5SP454-201ENST00000517231 127 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 AL512643.1-201ENST00000635735 524 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 Z99571.1-201ENST00000636677 394 ntBASIC3.83□□□□□ -1.8
USP25Q9UHP3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP25Q9UHP3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.83□□□□□ -1.8
USP25Q9UHP3 SNORA4.3-201ENST00000365564 137 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 RNU1-101P-201ENST00000391171 127 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP25Q9UHP3 MTCYBP4-201ENST00000401524 249 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 RPLP0P7-201ENST00000416050 667 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL139396.1-201ENST00000421137 167 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL669831.1-202ENST00000428504 417 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 RNU7-167P-201ENST00000459160 62 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 MTND4LP22-201ENST00000508209 276 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.82□□□□□ -1.8
USP25Q9UHP3 MIR3944-201ENST00000581277 108 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL670379.10-201ENST00000604330 253 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL670379.4-201ENST00000605279 254 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL670379.9-201ENST00000605428 253 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AC124303.1-201ENST00000605703 360 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 MIR15A-201ENST00000607334 83 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 U2.17-201ENST00000611454 95 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 DUSP12P1-201ENST00000612874 516 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 SNORD39.4-201ENST00000620099 78 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AL359757.2-201ENST00000624309 274 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 AC009093.8-201ENST00000641769 292 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.82□□□□□ -1.8
USP25Q9UHP3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 MTND4P27-201ENST00000450813 1354 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RNU6-434P-201ENST00000384376 107 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RNU6-393P-201ENST00000384475 107 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 SNORD70.1-201ENST00000391007 85 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RPL21P3-201ENST00000395517 478 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RPL37P10-201ENST00000412884 288 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 FABP5P14-201ENST00000437273 393 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 BRK1P2-201ENST00000442875 223 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AL133547.1-201ENST00000448546 220 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC146507.2-201ENST00000460608 476 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC106707.2-201ENST00000484182 374 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 FCF1P8-201ENST00000510322 597 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC005741.1-201ENST00000511094 432 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RPL39P5-202ENST00000512505 151 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 RNU2-69P-201ENST00000516061 100 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 COPS8P3-201ENST00000526024 482 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 AP005639.2-201ENST00000527592 928 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC106782.4-201ENST00000568264 210 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 MIR4790-201ENST00000577799 79 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 MIR3171-201ENST00000584270 74 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AC024220.1-201ENST00000603675 484 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 FAM157A-202ENST00000615155 405 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 AL161629.2-201ENST00000615347 275 ntBASIC3.81□□□□□ -1.8
USP25Q9UHP3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 MTND4LP32-201ENST00000636111 270 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms