Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 ZNF519P1-201ENST00000449011 1626 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL354685.2-201ENST00000448218 1447 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 CDC27P3-201ENST00000635418 1910 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.6-201ENST00000362350 114 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 RNU6-45P-201ENST00000384471 107 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AL353621.1-201ENST00000418219 243 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC104332.2-201ENST00000429959 156 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC022018.1-201ENST00000430685 241 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 RNU6-261P-201ENST00000459506 102 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 HMGB1P30-201ENST00000492455 606 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 RNU6-581P-201ENST00000516214 105 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 RNU6-314P-201ENST00000516574 104 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.693-201ENST00000516641 110 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AL512360.1-201ENST00000555346 234 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC234778.2-201ENST00000566241 354 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC005261.5-201ENST00000596280 355 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 RPL23AP78-201ENST00000599928 470 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AC010620.2-201ENST00000600135 313 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AL627309.6-201ENST00000606857 840 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 AF250324.2-201ENST00000608299 610 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 ATP5A1P2-202ENST00000616464 443 ntBASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LIMA1Q9UHB6 SNORD46.1-201ENST00000364139 104 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 RNU6-384P-201ENST00000364900 104 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.372-201ENST00000365599 102 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 RNU6-1127P-201ENST00000384580 107 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 MIR10A-201ENST00000385043 110 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AL138885.1-201ENST00000405921 675 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC009296.1-201ENST00000443146 155 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 MTND3P25-201ENST00000509243 135 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 RNU1-86P-201ENST00000516108 154 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 RNU1-107P-201ENST00000516617 154 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AL512310.1-201ENST00000548639 172 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 HMGB1P33-201ENST00000563485 527 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC092325.1-201ENST00000566449 554 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC007151.1-201ENST00000572774 483 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC093788.1-201ENST00000609356 927 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC092794.1-201ENST00000612734 582 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AC090617.7-201ENST00000623952 126 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 MTND4P14-201ENST00000435799 1354 ntBASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LIMA1Q9UHB6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 RPL17P50-201ENST00000396131 546 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 MIR548F1-201ENST00000408667 84 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC016831.2-201ENST00000417179 352 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 RNU7-180P-201ENST00000459240 63 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC011005.2-201ENST00000487324 359 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 LRRC34P2-201ENST00000514850 553 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 MIR892C-201ENST00000516410 77 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 RN7SKP57-201ENST00000517248 293 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AL137161.1-201ENST00000532231 390 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 BNIP3P6-201ENST00000549284 499 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AL391813.1-201ENST00000603098 260 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC087045.1-201ENST00000605856 382 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 RMST_4.1-201ENST00000616886 107 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMA1Q9UHB6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 SNORA69-201ENST00000383895 132 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 SNORA18.3-201ENST00000384122 132 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 RNU6-393P-201ENST00000384475 107 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 Y_RNA.554-201ENST00000384672 102 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms