Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-1069P-201ENST00000516612 133 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC005498.1-201ENST00000592125 465 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 RMST_8.1-201ENST00000610287 165 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL20A1Q9P218 uc_338.5-201ENST00000611839 155 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 U2.21-201ENST00000637295 81 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL20A1Q9P218 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL20A1Q9P218 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL20A1Q9P218 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU6-778P-201ENST00000363269 103 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU6-270P-201ENST00000364131 105 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU6-266P-201ENST00000364225 107 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU1-140P-201ENST00000365040 165 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU1-73P-201ENST00000383971 164 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 SNORA75B-201ENST00000384053 137 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AL356057.2-201ENST00000403318 432 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNA5SP38-201ENST00000410750 119 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU2-41P-201ENST00000410991 178 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU6-1148P-201ENST00000410992 104 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 AL353729.1-201ENST00000425044 720 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 RPL26P9-201ENST00000457466 433 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU6-329P-201ENST00000459618 107 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RPL23AP62-201ENST00000463396 453 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC011005.2-201ENST00000487324 359 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC096576.1-201ENST00000489014 359 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC114781.4-201ENST00000513707 639 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC087854.1-201ENST00000519706 414 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AP002404.1-201ENST00000532005 451 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 LARP7P3-201ENST00000579888 337 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 AC005261.5-201ENST00000596280 355 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 CTHRC1P1-201ENST00000605383 469 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 Y_RNA.804-201ENST00000615262 101 ntBASIC3.5□□□□□ -1.85
COL20A1Q9P218 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
COL20A1Q9P218 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL20A1Q9P218 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL20A1Q9P218 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-254P-201ENST00000363377 107 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 Y_RNA.324-201ENST00000365165 102 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-166P-201ENST00000384371 107 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-831P-201ENST00000384548 107 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-658P-201ENST00000384606 106 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 MIR450B-201ENST00000401182 78 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU2-3P-201ENST00000410144 191 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-1077P-201ENST00000410506 102 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 SETP5-201ENST00000437270 562 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 MTND1P11-201ENST00000456661 876 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 HMGN1P18-201ENST00000457642 277 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU7-66P-201ENST00000459469 62 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RPL23AP14-201ENST00000468281 468 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU6-864P-201ENST00000516256 108 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 RNU7-30P-201ENST00000516835 62 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 SNORA25.17-201ENST00000517184 124 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 MIR4742-201ENST00000581069 85 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC002044.1-201ENST00000606707 158 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC009994.1-201ENST00000606889 253 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC093732.2-201ENST00000607950 274 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC103710.3-201ENST00000608157 948 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AL121757.2-201ENST00000611223 313 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 AC073476.4-201ENST00000628409 72 ntBASIC3.49□□□□□ -1.85
COL20A1Q9P218 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL20A1Q9P218 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
COL20A1Q9P218 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL20A1Q9P218 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.48□□□□□ -1.85
COL20A1Q9P218 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL20A1Q9P218 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.48□□□□□ -1.85
COL20A1Q9P218 MIR22-201ENST00000362190 85 ntBASIC3.48□□□□□ -1.85
COL20A1Q9P218 SNORD3E-201ENST00000362899 217 ntBASIC3.48□□□□□ -1.85
COL20A1Q9P218 Y_RNA.111-201ENST00000363248 100 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms