Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC090888.2-201ENST00000559765 1144 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 MIR4999-201ENST00000585029 91 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC121334.2-201ENST00000605387 271 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 RNU6-946P-201ENST00000383878 107 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 RN7SKP32-201ENST00000410167 303 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 RPS27AP14-201ENST00000422868 454 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AL160275.3-201ENST00000423876 471 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 RPL37P21-201ENST00000435890 276 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC034244.1-201ENST00000507687 207 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC022616.6-201ENST00000520479 119 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AP001981.2-201ENST00000603241 418 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC018714.1-201ENST00000605028 208 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AP002782.1-201ENST00000623107 614 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 AC110994.2-201ENST00000635481 492 ntBASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KLHL28Q9NXS3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KLHL28Q9NXS3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RNU6-660P-201ENST00000364566 109 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RNU6-395P-201ENST00000365662 106 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RNU6-190P-201ENST00000384154 102 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 FTH1P15-201ENST00000406984 280 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 MIR1289-2-201ENST00000408360 111 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC092809.3-201ENST00000415453 231 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP39-201ENST00000415533 405 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RPL22P18-201ENST00000417197 377 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 Z73417.1-201ENST00000447373 778 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 FABP5P13-201ENST00000452144 328 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 SNORD11.1-201ENST00000459482 85 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC011979.2-201ENST00000527568 352 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AL713866.2-201ENST00000603579 219 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC009314.1-201ENST00000603871 304 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 MIR15A-201ENST00000607334 83 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AL355816.2-201ENST00000610049 647 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC010378.1-201ENST00000619270 362 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC068787.1-201ENST00000623908 691 ntBASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.96□□□□□ -2.1
KLHL28Q9NXS3 RNU4-28P-201ENST00000364739 141 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 RNU6-809P-201ENST00000384461 107 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 WARS2P1-201ENST00000429678 537 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL008629.1-201ENST00000438615 184 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL118520.1-201ENST00000450770 291 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms