Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 GPM6BP2-201ENST00000432046 144 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC092573.2-201ENST00000434546 243 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 GPM6BP1-201ENST00000446387 144 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC104058.1-201ENST00000448028 297 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC092436.1-201ENST00000506450 503 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RNA5SP282-201ENST00000516355 108 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RNU6-914P-201ENST00000516749 109 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 HIF1AP1-201ENST00000553642 175 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AL133241.1-201ENST00000556832 487 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC002553.4-201ENST00000616896 331 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC024940.5-201ENST00000622889 474 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 CISD1P1-201ENST00000393907 327 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RNA5SP111-201ENST00000411386 101 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 MTND1P23-201ENST00000416931 372 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 ZNF863P-201ENST00000426746 417 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 GTF2IP20-201ENST00000431663 360 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 MTCO3P18-201ENST00000440206 761 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RBMX2P4-201ENST00000441256 376 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 FABP5P15-201ENST00000453566 214 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RPL38P4-201ENST00000502376 214 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 FAM92A1P2-202ENST00000504766 877 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RBBP4P6-201ENST00000508098 202 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RNA5SP401-201ENST00000515920 127 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AP000867.2-201ENST00000532468 320 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 MIR3605-201ENST00000583214 100 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 RPL23AP78-201ENST00000599928 470 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AP000907.4-201ENST00000604143 237 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AL670379.4-201ENST00000605279 254 ntBASIC3.13□□□□□ -1.91
DDX4Q9NQI0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX4Q9NQI0 AL354685.2-201ENST00000448218 1447 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RNU6-451P-201ENST00000362921 107 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RNU6-512P-201ENST00000364438 103 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RN7SKP284-201ENST00000411002 343 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 USP9YP6-201ENST00000413550 854 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AL160275.3-201ENST00000423876 471 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AL118520.1-201ENST00000450770 291 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC092798.1-201ENST00000458542 409 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 SRIP1-201ENST00000489235 288 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC091885.1-201ENST00000506658 268 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC009901.1-201ENST00000506703 541 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AL137161.1-201ENST00000532231 390 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MIR4435-1-201ENST00000582552 80 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MIR4635-201ENST00000583759 79 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MIR15A-201ENST00000607334 83 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 AL512643.1-201ENST00000635735 524 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
DDX4Q9NQI0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX4Q9NQI0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 Y_RNA.38-201ENST00000362617 102 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AL606923.1-201ENST00000406616 190 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 RNU6-373P-201ENST00000411247 98 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 ARL5AP1-201ENST00000418991 388 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AL590639.1-201ENST00000456484 337 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AL135752.1-201ENST00000479477 471 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 PRDX4P1-201ENST00000507189 574 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms