Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC091885.1-201ENST00000506658 268 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 CCDC34P1-201ENST00000507441 517 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC010265.1-201ENST00000513509 211 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 MTND4P7-201ENST00000523876 130 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AL121579.1-201ENST00000555129 305 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 BNIP3P10-201ENST00000605360 577 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 RNU6-89P-201ENST00000606519 100 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC009570.1-201ENST00000609599 745 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC135507.2-201ENST00000612443 309 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC009033.1-201ENST00000624279 431 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 Z99571.1-201ENST00000636677 394 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 CUL1P1-201ENST00000509510 2425 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.86-201ENST00000363020 111 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.160-201ENST00000363677 92 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 SNORA80A-201ENST00000363922 136 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MIR325-201ENST00000385260 98 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 RNU6-332P-201ENST00000391193 108 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC022028.1-201ENST00000412054 408 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC092573.2-201ENST00000434546 243 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL121601.2-201ENST00000438019 707 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 RPS15AP27-201ENST00000449183 343 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MTND3P10-201ENST00000450967 341 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL135752.1-201ENST00000479477 471 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 SRIP1-201ENST00000489235 288 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MTCO2P30-201ENST00000503662 364 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 RNA5SP290-201ENST00000517133 127 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 BNIP3P6-201ENST00000549284 499 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC078814.3-201ENST00000553036 491 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL118558.2-201ENST00000556294 238 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL512643.1-201ENST00000635735 524 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 AL049641.1-201ENST00000441055 1948 ntBASIC2.74□□□□□ -1.97
SIX2Q9NPC8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX2Q9NPC8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC002546.1-201ENST00000588041 2504 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 SNORD62.1-201ENST00000362541 86 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 RNU6-859P-201ENST00000362728 107 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 SNORA72.1-201ENST00000363485 129 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 RNU6-522P-201ENST00000364497 107 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 SNORA4.3-201ENST00000365564 137 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 SNORA48.8-201ENST00000391324 134 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AL591034.1-201ENST00000407447 340 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC092047.1-201ENST00000424997 240 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AL669831.1-202ENST00000428504 417 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 NEK4P1-201ENST00000433383 879 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AL512844.2-201ENST00000433990 593 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 GTF2IP13-201ENST00000438487 386 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC108938.1-201ENST00000451204 136 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 SCARNA18-201ENST00000459004 134 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC009901.1-201ENST00000506703 541 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC025465.4-201ENST00000513422 638 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 RNU6-1315P-201ENST00000517187 99 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 CENPUP1-201ENST00000526649 1202 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC018638.8-201ENST00000588755 281 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC136601.2-201ENST00000604356 474 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC092794.2-201ENST00000620933 563 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AC090617.10-201ENST00000624308 134 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 AL008636.1-201ENST00000625038 1018 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms