Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC107016.2-201ENST00000547968 190 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AC018638.8-201ENST00000588755 281 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AC093913.1-201ENST00000614178 329 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AP003400.5-201ENST00000624827 617 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 CBX3P1-201ENST00000325243 554 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RNU6-799P-201ENST00000363567 107 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RNU1-140P-201ENST00000365040 165 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIR514A2-201ENST00000385131 88 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIR514A3-201ENST00000385132 88 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIR301A-201ENST00000385261 86 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AL592114.1-201ENST00000403842 483 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 FAT1P1-201ENST00000406588 507 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC009161.1-201ENST00000417306 376 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AL513185.2-201ENST00000425543 193 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC098614.3-201ENST00000438957 440 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 Z82210.1-201ENST00000440037 231 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RPL37P4-201ENST00000448908 268 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RPS29P12-201ENST00000460178 152 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 HMGN2P26-201ENST00000463169 339 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC139453.3-201ENST00000493276 369 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RPL30P5-201ENST00000494923 336 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC091885.1-201ENST00000506658 268 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC010486.1-201ENST00000511793 424 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 RNA5SP165-201ENST00000517142 115 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC022080.3-201ENST00000544433 482 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIR3200-201ENST00000580767 85 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC078899.3-201ENST00000599065 212 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 ATP1B3P1-201ENST00000605365 821 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC004805.2-201ENST00000605382 482 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC092807.2-201ENST00000609367 243 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC063943.3-201ENST00000615562 356 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 AC027309.3-201ENST00000623419 351 ntBASIC2.96□□□□□ -1.94
PCDH9Q9HC56 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH9Q9HC56 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AL049641.1-201ENST00000441055 1948 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RNU6-140P-201ENST00000384566 108 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 MIR578-201ENST00000384828 96 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RNA5SP219-201ENST00000390940 113 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 SNORA16.2-201ENST00000390991 127 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 MIR1289-1-201ENST00000408836 144 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AL591704.1-201ENST00000432574 275 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RPL12P25-201ENST00000455592 494 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC007547.1-201ENST00000462177 490 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AL135752.1-201ENST00000479477 471 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RPL21P93-201ENST00000480465 489 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC112206.3-201ENST00000514578 389 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.702-201ENST00000516843 96 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RNU6-1315P-201ENST00000517187 99 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 RPL7P20-201ENST00000520308 745 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AP000763.2-201ENST00000540641 163 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 MIR5692A1-201ENST00000580523 69 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC092747.3-201ENST00000603769 301 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 AL136221.1-201ENST00000621449 509 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 MTND4P12-201ENST00000498999 1377 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH9Q9HC56 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
PCDH9Q9HC56 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-371P-201ENST00000364283 108 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-434P-201ENST00000384376 107 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-45P-201ENST00000384471 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms