Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 SNORA37-201ENST00000384504 129 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 SNORA70C-201ENST00000384538 135 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AL022722.2-201ENST00000402519 180 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AL603910.2-201ENST00000407268 136 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP317-201ENST00000410176 116 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP311-201ENST00000411290 116 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RPS12P23-201ENST00000419579 400 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC096920.1-201ENST00000423991 241 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 OR4C10P-201ENST00000434991 931 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RPL23AP22-201ENST00000437556 453 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC006011.1-201ENST00000442758 349 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RPL30P10-201ENST00000488148 337 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC139453.3-201ENST00000493276 369 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC067942.3-201ENST00000512025 362 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC099522.1-202ENST00000514718 367 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP315-201ENST00000516340 116 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP312-201ENST00000517068 116 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 IGKV2-38-201ENST00000517443 247 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 SRGNP1-201ENST00000603392 451 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC009779.6-201ENST00000603972 165 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AP000787.2-201ENST00000604432 568 ntBASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A2Q9H9S3 MARK2P15-201ENST00000432204 2186 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.16-201ENST00000362421 102 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-280P-201ENST00000364145 104 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP130-201ENST00000364431 114 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.274-201ENST00000364714 101 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RNU2-20P-201ENST00000410425 191 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC007560.1-201ENST00000426912 237 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AL513124.1-201ENST00000450410 614 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC079354.2-201ENST00000453523 154 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 FABP5P15-201ENST00000453566 214 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 snoU109.2-201ENST00000459316 135 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RNU7-143P-201ENST00000516781 65 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP290-201ENST00000517133 127 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC025627.2-201ENST00000576220 160 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC006077.1-201ENST00000604746 343 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 MIR376A1-201ENST00000616574 68 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 AC068724.3-201ENST00000625906 87 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 U6.92-201ENST00000636464 89 ntBASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A2Q9H9S3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-774P-201ENST00000363238 107 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.785-201ENST00000384290 109 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RNU1-13P-201ENST00000384499 162 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 SNORA12.2-201ENST00000391040 156 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RPL21P75-201ENST00000396599 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 MIR190B-201ENST00000401119 79 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RPL21P28-201ENST00000401418 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 Z85995.1-201ENST00000415547 335 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AL590556.1-201ENST00000423231 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RPS6P12-201ENST00000432491 726 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 U8.22-201ENST00000459141 133 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RPL21P11-201ENST00000461458 483 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms