Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SAR1AP2-201ENST00000392696 594 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 HLFP1-201ENST00000402375 499 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AL591034.2-201ENST00000402839 359 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RN7SKP111-201ENST00000410349 271 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RNU2-38P-201ENST00000410856 79 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 PHBP14-201ENST00000512887 367 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-840P-201ENST00000517275 65 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 HSPE1P20-201ENST00000538133 289 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 CPDP1-201ENST00000579660 283 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 MIR4325-201ENST00000583049 90 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC067852.4-201ENST00000590314 478 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RPS29P30-201ENST00000600975 111 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC012669.1-201ENST00000603209 283 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AP000787.2-201ENST00000604432 568 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 HMGB1P50-201ENST00000605814 607 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 AC034102.8-201ENST00000615146 484 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 FTX_2.1-201ENST00000618816 94 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-200P-201ENST00000364743 107 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.785-201ENST00000384290 109 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.483-201ENST00000384380 101 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-933P-201ENST00000384424 107 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AL590135.1-201ENST00000422215 156 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AL590399.6-201ENST00000446396 307 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AL360271.2-201ENST00000447710 161 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RPL29P29-201ENST00000448725 423 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 CHEK2P4-201ENST00000450340 246 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-1037P-201ENST00000459571 107 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-182P-201ENST00000516970 105 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RN7SKP289-201ENST00000517244 295 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AC104576.1-201ENST00000524225 88 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AC006600.1-201ENST00000572529 153 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AL137843.1-201ENST00000605078 385 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AC006023.2-201ENST00000609916 167 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AL159153.1-201ENST00000619688 317 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 AP003355.3-201ENST00000623465 114 ntBASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP4Q9C0A0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.53□□□□□ -1.69
CNTNAP4Q9C0A0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CNTNAP4Q9C0A0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
CNTNAP4Q9C0A0 LINC01109-201ENST00000603837 3081 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.324-201ENST00000365165 102 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-611P-201ENST00000384276 104 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-712P-201ENST00000410558 100 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AP000275.1-201ENST00000411943 390 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AC087588.1-201ENST00000462203 316 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AP001486.1-201ENST00000463339 476 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 RPL37P6-202ENST00000464216 403 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 FO393415.2-201ENST00000480085 343 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 TRBV12-2-201ENST00000489763 344 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 MTND3P25-201ENST00000509243 135 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-927P-201ENST00000516199 100 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.687-201ENST00000516558 91 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 CBX3P8-201ENST00000532412 525 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 U4.6-201ENST00000621618 127 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 MIR6852-201ENST00000621699 66 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 AC004944.1-201ENST00000517807 3059 ntBASIC4.52□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.19-201ENST00000362462 99 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-1159P-201ENST00000362933 107 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 RPL21P13-201ENST00000488305 481 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-143P-201ENST00000516942 93 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 AL390123.1-201ENST00000603216 237 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 RMST_4.1-201ENST00000616886 107 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms