Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL133445.2-201ENST00000611191 527 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AL353997.5-201ENST00000618886 171 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MIR16-2-201ENST00000362117 81 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 MIR302D-201ENST00000362275 68 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU6-1010P-201ENST00000362757 107 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU1-17P-201ENST00000363022 152 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU4-13P-201ENST00000364019 141 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU6-1032P-201ENST00000384100 107 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 SNORA70.7-201ENST00000384159 133 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU6-432P-201ENST00000384196 109 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 SNORA40.6-201ENST00000391153 128 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 CR769776.1-201ENST00000441254 787 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU7-136P-201ENST00000458819 69 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 SNORD97-201ENST00000459187 142 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RPL36AP21-201ENST00000490372 323 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC109927.2-201ENST00000506416 303 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 MTCYBP16-201ENST00000509187 1129 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC025465.3-201ENST00000510570 311 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 MTCYBP43-201ENST00000513621 740 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RNU6-583P-201ENST00000516012 92 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AP004247.1-201ENST00000531556 1289 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC018630.3-201ENST00000542637 96 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC093012.1-202ENST00000549403 582 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 HSPE1P19-201ENST00000603327 295 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AL157834.3-201ENST00000615543 103 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC005858.4-201ENST00000623191 700 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC092125.1-201ENST00000562568 1995 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 CDR1-202ENST00000625883 1485 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
LIMD2Q9BT23 FARSBP1-201ENST00000435808 1778 ntBASIC0.73□□□□□ -2.29
LIMD2Q9BT23 AC092447.10-201ENST00000620607 1652 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 SNORD114-19-201ENST00000363072 75 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RNU6-529P-201ENST00000363383 104 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 SNORA7.1-201ENST00000363750 139 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RNU6-271P-201ENST00000363858 105 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RNU6-707P-201ENST00000364647 95 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RNU6-546P-201ENST00000383991 107 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RNU2-32P-201ENST00000411193 191 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 PIGPP2-201ENST00000411569 458 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC139712.2-201ENST00000424302 339 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 USP9YP18-201ENST00000425912 695 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC092634.2-201ENST00000428146 1010 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC010631.1-201ENST00000474150 156 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 RPL30P7-201ENST00000479312 323 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC023194.1-201ENST00000493084 308 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 MTCYBP18-201ENST00000501056 747 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 HMGB1P28-201ENST00000507778 552 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC022616.8-201ENST00000533569 253 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC023538.1-201ENST00000534576 736 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 SUB1P4-201ENST00000566062 339 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC073413.2-201ENST00000604332 360 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 AC123912.5-201ENST00000605470 343 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.72□□□□□ -2.29
LIMD2Q9BT23 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AL079343.1-201ENST00000572358 1771 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 SNORD115-3-201ENST00000363100 82 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 SNORA25.8-201ENST00000364831 128 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 U8.10-201ENST00000384260 133 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 RNU6-482P-201ENST00000391068 107 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 UBE2V1P15-201ENST00000407776 448 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 BX664727.1-201ENST00000416024 466 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AL355994.1-201ENST00000424379 260 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 CST2P1-201ENST00000425770 87 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC092648.1-201ENST00000425870 423 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC104058.1-201ENST00000448028 297 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms