Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX3Q99909 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 ACA59.2-201ENST00000517061 156 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX3Q99909 EIF4BP1-201ENST00000554881 351 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 AC092325.1-201ENST00000566449 554 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AC087045.1-201ENST00000605856 382 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 AC104237.2-201ENST00000612456 443 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 uc_338.14-201ENST00000613162 166 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 AP001486.3-201ENST00000615334 372 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX3Q99909 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 SCARNA15.3-201ENST00000626315 122 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 SCARNA4.1-201ENST00000628597 123 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.4□□□□□ -2.03
SSX3Q99909 HSPA8P4-201ENST00000511877 1920 ntBASIC2.4□□□□□ -2.03
SSX3Q99909 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.39□□□□□ -2.03
SSX3Q99909 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SSX3Q99909 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RNU6-1029P-201ENST00000384109 107 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RNU6-1119P-201ENST00000384349 108 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RNU6-748P-201ENST00000384648 107 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RNU6-550P-201ENST00000391057 101 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RNU2-9P-201ENST00000410194 145 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX3Q99909 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX3Q99909 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.39□□□□□ -2.03
SSX3Q99909 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.39□□□□□ -2.03
SSX3Q99909 AC004383.1-201ENST00000438135 289 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 RPS15AP9-201ENST00000439856 381 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 NDUFB1P2-201ENST00000449477 176 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AL162395.1-201ENST00000457882 422 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AC006512.1-201ENST00000468816 291 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AL049873.1-201ENST00000480540 376 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AC079382.1-201ENST00000493346 557 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AC097462.2-201ENST00000504623 481 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 SCARNA13-201ENST00000516672 275 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.39□□□□□ -2.03
SSX3Q99909 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SSX3Q99909 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX3Q99909 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.39□□□□□ -2.03
SSX3Q99909 AC008536.2-201ENST00000607284 349 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 MIR7106-201ENST00000612419 65 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AC007318.2-201ENST00000620999 243 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.39□□□□□ -2.03
SSX3Q99909 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSX3Q99909 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
SSX3Q99909 AL109809.4-201ENST00000603520 2185 ntBASIC2.39□□□□□ -2.03
SSX3Q99909 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.38□□□□□ -2.03
SSX3Q99909 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSX3Q99909 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSX3Q99909 RNU6-371P-201ENST00000364283 108 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 SNORD14B-201ENST00000364533 90 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 Y_RNA.296-201ENST00000364930 108 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 RNU1-100P-201ENST00000365255 165 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 RNU5A-6P-201ENST00000384136 116 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 RNU6-1042P-201ENST00000384204 107 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 RNU6-851P-201ENST00000384565 107 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 MIR10A-201ENST00000385043 110 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 MIR34A-201ENST00000385130 110 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSX3Q99909 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSX3Q99909 AC016831.2-201ENST00000417179 352 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 MTATP6P18-201ENST00000417994 673 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.38□□□□□ -2.03
SSX3Q99909 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 AL596276.1-201ENST00000434465 418 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 AC025750.2-201ENST00000442609 450 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 IFNA11P-201ENST00000446352 526 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AL360271.2-201ENST00000447710 161 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 MTND1P29-201ENST00000448112 647 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SSX3Q99909 RNA5SP112-201ENST00000515937 99 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 AP005902.1-201ENST00000521358 186 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
SSX3Q99909 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX3Q99909 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC025449.1-201ENST00000603896 529 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC008945.2-201ENST00000606056 604 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC245008.1-201ENST00000608123 476 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC090115.4-201ENST00000609970 188 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms