Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 CEP170P1-201ENST00000502249 4587 ntBASIC3.67□□□□□ -1.82
HIST1H2AJQ99878 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H2AJQ99878 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H2AJQ99878 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.67□□□□□ -1.82
HIST1H2AJQ99878 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H2AJQ99878 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RNU1-115P-201ENST00000365329 160 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RNU6-72P-201ENST00000384285 79 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 Y_RNA.533-201ENST00000384596 114 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 MIR1183-201ENST00000408856 89 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AL139247.1-201ENST00000422768 325 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AL591419.1-201ENST00000427423 339 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AC099799.1-201ENST00000439809 192 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 HIGD1AP2-201ENST00000446367 280 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 BTF3P15-201ENST00000455606 336 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 U8.21-201ENST00000459536 136 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RNA5SP208-201ENST00000516156 78 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 RNU6-1183P-201ENST00000517054 60 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AC109479.2-201ENST00000517842 174 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AC023442.1-201ENST00000531247 422 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AL117187.1-201ENST00000555482 181 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AL158827.2-201ENST00000602494 330 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AL691447.3-201ENST00000635020 330 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 U2.21-201ENST00000637295 81 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 AC005592.1-201ENST00000566527 1640 ntBASIC3.66□□□□□ -1.82
HIST1H2AJQ99878 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.65□□□□□ -1.82
HIST1H2AJQ99878 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.82
HIST1H2AJQ99878 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HIST1H2AJQ99878 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
HIST1H2AJQ99878 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HIST1H2AJQ99878 RNU6-778P-201ENST00000363269 103 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 Y_RNA.314-201ENST00000365114 102 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RNU5E-7P-201ENST00000365290 117 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RHEBP3-201ENST00000411920 351 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 NUP35P1-201ENST00000422734 947 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 MTND3P9-201ENST00000429526 346 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AC091390.1-201ENST00000433904 331 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AC013470.1-201ENST00000453438 462 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RPL21P104-201ENST00000464143 478 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AC116655.1-201ENST00000508324 901 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RNU4-77P-201ENST00000516692 156 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AP005902.1-201ENST00000521358 186 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 SRGNP1-201ENST00000603392 451 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AC104695.3-201ENST00000604052 296 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 SNORD58B-201ENST00000607313 66 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 HMGB1P24-202ENST00000615653 685 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H2AJQ99878 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 AC091812.1-201ENST00000432235 1948 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RNU6-78P-201ENST00000362897 107 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RNY1P16-201ENST00000363063 111 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RNU6-463P-201ENST00000384340 107 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 AL591034.2-201ENST00000402839 359 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 MIR548F4-201ENST00000408515 105 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RNU2-23P-201ENST00000410545 195 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RNA5SP31-201ENST00000411144 127 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 NUTF2P7-201ENST00000453086 375 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 AL353752.1-201ENST00000454946 260 ntBASIC3.64□□□□□ -1.83
HIST1H2AJQ99878 SNRPGP5-201ENST00000456003 220 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms