Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MIR4273-201ENST00000582824 84 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.36□□□□□ -1.87
TIMP4Q99727 AC098826.3-201ENST00000603823 466 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 SNORD58B-201ENST00000607313 66 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC007792.1-201ENST00000623023 402 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.36□□□□□ -1.87
TIMP4Q99727 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 ZNF72P-201ENST00000425869 1908 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TIMP4Q99727 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TIMP4Q99727 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TIMP4Q99727 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
TIMP4Q99727 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.35□□□□□ -1.87
TIMP4Q99727 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TIMP4Q99727 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TIMP4Q99727 SNORA31-201ENST00000362607 130 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 Y_RNA.39-201ENST00000362620 98 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 RNA5SP119-201ENST00000362715 117 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 RNU6-1167P-201ENST00000363227 94 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 MIR514A1-201ENST00000385133 98 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TIMP4Q99727 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 RNU6-823P-201ENST00000391042 103 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AL030996.1-201ENST00000411430 235 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AL353621.1-201ENST00000418219 243 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC244098.2-201ENST00000422068 99 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 UBE2D3P2-201ENST00000424409 445 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC091390.3-201ENST00000426478 338 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AL133396.1-201ENST00000432048 687 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AC099799.1-201ENST00000439809 192 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC011816.1-201ENST00000441346 546 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 CEACAMP4-201ENST00000457676 421 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC091153.1-201ENST00000466297 402 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC114801.2-201ENST00000503825 781 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AC104619.4-201ENST00000510773 249 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 RN7SKP18-201ENST00000516005 275 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 RNU2-58P-201ENST00000516403 183 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 Y_RNA.721-201ENST00000517207 102 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.35□□□□□ -1.87
TIMP4Q99727 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AC024220.1-201ENST00000603675 484 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC123912.5-201ENST00000605470 343 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 MIR3976-201ENST00000606807 139 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AL606534.2-204ENST00000635008 178 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 AC009093.8-201ENST00000641769 292 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TIMP4Q99727 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TIMP4Q99727 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TIMP4Q99727 AL365440.1-201ENST00000436135 2167 ntBASIC3.35□□□□□ -1.87
TIMP4Q99727 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TIMP4Q99727 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TIMP4Q99727 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TIMP4Q99727 SNORA63.7-201ENST00000365579 123 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TIMP4Q99727 MIR301A-201ENST00000385261 86 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RNU6-325P-201ENST00000411132 105 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RPS3AP46-201ENST00000448352 682 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RPL23AP31-201ENST00000456160 467 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC010285.1-201ENST00000470580 392 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RPS23P3-201ENST00000470993 430 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 FO393415.2-201ENST00000480085 343 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 MRPS35P2-201ENST00000508242 191 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC113155.1-201ENST00000511141 769 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RNU6-1315P-201ENST00000517187 99 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 RNU6-794P-201ENST00000517261 64 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.34□□□□□ -1.87
TIMP4Q99727 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
TIMP4Q99727 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 MYL12BP1-201ENST00000569826 507 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 MIR1273C-201ENST00000578669 77 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.34□□□□□ -1.87
TIMP4Q99727 KLKP1-201ENST00000595979 403 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.34□□□□□ -1.87
TIMP4Q99727 AL121917.1-203ENST00000605534 577 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 PRR13P7-201ENST00000605538 430 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.34□□□□□ -1.87
TIMP4Q99727 AC012531.5-201ENST00000611375 151 ntBASIC3.34□□□□□ -1.87
TIMP4Q99727 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.88
TIMP4Q99727 AC004925.1-201ENST00000624256 2706 ntBASIC3.34□□□□□ -1.88
TIMP4Q99727 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TIMP4Q99727 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TIMP4Q99727 RNY3P11-201ENST00000364153 102 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 Y_RNA.476-201ENST00000384347 108 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 MIR7-3-201ENST00000384898 110 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 MT-TR-201ENST00000387439 65 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 RNU6-1109P-201ENST00000391187 107 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 HSPE1P26-201ENST00000405341 275 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms