Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
COL12A1Q99715 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AL133241.1-201ENST00000556832 487 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 AC012414.6-201ENST00000568241 401 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 AL365204.3-201ENST00000612448 685 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.14□□□□□ -2.39
COL12A1Q99715 SNORA68.1-201ENST00000364537 132 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 MIR587-201ENST00000384845 96 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
COL12A1Q99715 RNA5SP451-201ENST00000410588 110 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.14□□□□□ -2.39
COL12A1Q99715 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.14□□□□□ -2.39
COL12A1Q99715 AC015908.1-201ENST00000478739 476 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 OR52A4P-202ENST00000481634 799 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC021171.1-201ENST00000603137 706 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC106900.2-201ENST00000604994 317 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC099842.1-201ENST00000619919 596 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC099654.5-201ENST00000636479 350 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
COL12A1Q99715 MIR30A-201ENST00000385092 71 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 AC093106.2-201ENST00000428212 385 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.14□□□□□ -2.39
COL12A1Q99715 AL163195.1-201ENST00000496941 348 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 SCARNA21.1-201ENST00000515996 128 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 SCARNA16.2-201ENST00000516520 172 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.14□□□□□ -2.39
COL12A1Q99715 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.14□□□□□ -2.39
COL12A1Q99715 AL157871.3-201ENST00000557231 293 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 MIR6516-201ENST00000630554 81 ntBASIC0.14□□□□□ -2.39
COL12A1Q99715 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
COL12A1Q99715 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.13□□□□□ -2.39
COL12A1Q99715 RNU6-1222P-201ENST00000384615 107 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 MIR493-201ENST00000385254 89 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 RNU6-272P-201ENST00000411028 104 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 RNU2-64P-201ENST00000411315 191 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 ARPC3P5-201ENST00000448802 534 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 AL049830.1-201ENST00000468034 425 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.13□□□□□ -2.39
COL12A1Q99715 Y_RNA.711-201ENST00000516993 102 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 AC024405.2-202ENST00000532731 184 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 MIR4667-201ENST00000578933 66 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 MIR4441-201ENST00000582623 100 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.13□□□□□ -2.39
COL12A1Q99715 AC093838.1-201ENST00000613014 469 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.13□□□□□ -2.39
COL12A1Q99715 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.13□□□□□ -2.39
COL12A1Q99715 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.13□□□□□ -2.39
COL12A1Q99715 Y_RNA.475-201ENST00000384345 101 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.13□□□□□ -2.39
COL12A1Q99715 RNA5SP222-201ENST00000411039 105 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.13□□□□□ -2.39
COL12A1Q99715 AC092047.1-201ENST00000424997 240 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 SNRPGP6-201ENST00000451124 220 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 RPS26P55-201ENST00000471178 356 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.13□□□□□ -2.39
COL12A1Q99715 AC011260.1-201ENST00000578420 472 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 FAM60CP-201ENST00000591086 664 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
COL12A1Q99715 AL159152.1-201ENST00000635019 2587 ntBASIC0.13□□□□□ -2.39
COL12A1Q99715 RNU6-674P-201ENST00000363831 107 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 RNU6-514P-201ENST00000384208 107 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.12□□□□□ -2.39
COL12A1Q99715 RPL7L1P10-201ENST00000427790 463 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC021146.9-201ENST00000512503 156 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC091489.2-201ENST00000566263 604 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.12□□□□□ -2.39
COL12A1Q99715 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC006963.1-201ENST00000624003 1052 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 Y_RNA.67-201ENST00000362870 100 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 RNU1-119P-201ENST00000391122 165 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 ZNF863P-201ENST00000426746 417 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.12□□□□□ -2.39
COL12A1Q99715 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC004062.1-201ENST00000509926 645 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC008562.1-201ENST00000521763 330 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC087685.1-201ENST00000587507 141 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AL512506.2-201ENST00000624472 458 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
COL12A1Q99715 U3.29-201ENST00000391296 212 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AL589655.1-201ENST00000405398 482 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 MIR1250-201ENST00000408098 113 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC092634.6-201ENST00000418558 192 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.12□□□□□ -2.39
COL12A1Q99715 AC145146.1-201ENST00000496370 254 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 AL133373.1-201ENST00000497098 94 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 SCARNA8-201ENST00000515924 131 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 SNRPGP16-201ENST00000533275 226 ntBASIC0.12□□□□□ -2.39
COL12A1Q99715 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.12□□□□□ -2.39
COL12A1Q99715 TPTE2P4-201ENST00000258589 1605 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AL136372.1-201ENST00000403060 228 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 MTCYBP24-201ENST00000420387 1106 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 UBE2D3P2-201ENST00000424409 445 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 USP9YP24-201ENST00000434374 697 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms