Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.9□□□□□ -2.11
CDX2Q99626 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AC244505.5-201ENST00000443639 207 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.9□□□□□ -2.11
CDX2Q99626 AL606662.1-201ENST00000445763 553 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 ELOCP30-201ENST00000447108 299 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 SSXP1-201ENST00000453640 473 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AL122001.1-201ENST00000457027 370 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 RPL26P9-201ENST00000457466 433 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.9□□□□□ -2.11
CDX2Q99626 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.9□□□□□ -2.11
CDX2Q99626 RNU6-64P-201ENST00000517119 105 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.9□□□□□ -2.11
CDX2Q99626 AC009094.1-201ENST00000564443 426 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.11
CDX2Q99626 AC098848.2-201ENST00000588023 330 ntBASIC1.9□□□□□ -2.11
CDX2Q99626 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.9□□□□□ -2.11
CDX2Q99626 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDX2Q99626 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDX2Q99626 OR4G1P-203ENST00000641984 1631 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNU6-1167P-201ENST00000363227 94 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNU6-1284P-201ENST00000363701 100 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 SNORA7.1-201ENST00000363750 139 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNU5A-8P-201ENST00000364102 114 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.89□□□□□ -2.11
CDX2Q99626 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CDX2Q99626 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.89□□□□□ -2.11
CDX2Q99626 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNU2-49P-201ENST00000410666 184 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 NDUFS5P4-201ENST00000412983 318 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RPS24P7-201ENST00000416921 246 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.89□□□□□ -2.11
CDX2Q99626 HMGB1P9-201ENST00000429856 646 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX2Q99626 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.89□□□□□ -2.11
CDX2Q99626 ART2BP-201ENST00000453501 499 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX2Q99626 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDX2Q99626 RNU5F-8P-201ENST00000515941 111 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNU6-703P-201ENST00000516946 107 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 RNA5SP290-201ENST00000517133 127 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX2Q99626 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.89□□□□□ -2.11
CDX2Q99626 AC093012.1-202ENST00000549403 582 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDX2Q99626 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX2Q99626 AC145350.1-201ENST00000567426 208 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC008088.1-201ENST00000580993 280 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.89□□□□□ -2.11
CDX2Q99626 DPPA3P3-201ENST00000603842 430 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC025588.2-201ENST00000604851 466 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC004805.2-201ENST00000605382 482 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC025594.3-201ENST00000613068 790 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.89□□□□□ -2.11
CDX2Q99626 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDX2Q99626 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CDX2Q99626 AC092125.1-201ENST00000562568 1995 ntBASIC1.89□□□□□ -2.11
CDX2Q99626 AC005336.3-201ENST00000623833 2679 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDX2Q99626 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX2Q99626 RPL26P27-201ENST00000414397 437 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC096649.2-201ENST00000416186 393 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC016907.1-201ENST00000419483 435 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX2Q99626 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 VN1R108P-201ENST00000431580 830 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 AL445567.1-201ENST00000439121 144 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX2Q99626 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX2Q99626 RPF2P2-201ENST00000504693 896 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC013828.2-201ENST00000532487 235 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX2Q99626 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 MIR4307-201ENST00000582802 84 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC040904.1-201ENST00000590850 223 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC018714.1-201ENST00000605028 208 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 SNORD14A-201ENST00000606526 91 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC135507.1-201ENST00000607214 561 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC245008.1-201ENST00000608123 476 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDX2Q99626 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC009090.3-201ENST00000616553 565 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AC091304.6-201ENST00000619761 202 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.88□□□□□ -2.11
CDX2Q99626 AC091965.5-201ENST00000624785 342 ntBASIC1.88□□□□□ -2.11
CDX2Q99626 MIR7515-201ENST00000637837 67 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms