Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC115989.2-201ENST00000578640 563 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 MIR5739-201ENST00000619803 80 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC100821.1-201ENST00000523153 2479 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 AL139098.1-201ENST00000407291 389 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 MTCO3P2-201ENST00000457365 171 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
IFT140Q96RY7 RNA5SP112-201ENST00000515937 99 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 AL356432.3-201ENST00000568952 465 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.87□□□□□ -2.27
IFT140Q96RY7 AC087045.1-201ENST00000605856 382 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 AL359854.1-201ENST00000614203 1594 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 GDI2P1-201ENST00000429312 1336 ntBASIC0.87□□□□□ -2.27
IFT140Q96RY7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 BPY2DP-201ENST00000422208 265 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 EIF4EP2-201ENST00000422816 654 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC026271.5-201ENST00000577873 130 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 MTCYBP22-201ENST00000603788 447 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 Z69720.2-201ENST00000624755 279 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 Y_RNA.67-201ENST00000362870 100 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 RNU6-1164P-201ENST00000364428 107 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 RNU6-741P-201ENST00000383889 107 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
IFT140Q96RY7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AP003066.2-201ENST00000529375 555 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.86□□□□□ -2.27
IFT140Q96RY7 BX322635.1-201ENST00000605804 496 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 uc_338.14-201ENST00000613162 166 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 AC007490.1-201ENST00000624321 703 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 MIR5087-201ENST00000635826 76 ntBASIC0.86□□□□□ -2.27
IFT140Q96RY7 SEC63P2-201ENST00000503863 1939 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 RNU6-152P-201ENST00000384037 107 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 BTF3P8-201ENST00000414577 526 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 AL590365.1-201ENST00000450788 243 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 CYP2C59P-201ENST00000457790 269 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 HMGN1P10-201ENST00000474557 553 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 RNA5SP291-201ENST00000517222 105 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
IFT140Q96RY7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 AC119674.1-220ENST00000641502 1048 ntBASIC0.85□□□□□ -2.27
IFT140Q96RY7 SNORA25B-201ENST00000365507 128 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 MIR515-2-201ENST00000384883 83 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 MIR515-1-201ENST00000384884 83 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 AC007919.1-201ENST00000429380 217 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.84□□□□□ -2.28
IFT140Q96RY7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 AC099513.1-201ENST00000490423 301 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
IFT140Q96RY7 SNORA31.22-201ENST00000517204 135 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 MIR4514-201ENST00000581410 57 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 AC099842.1-201ENST00000619919 596 ntBASIC0.84□□□□□ -2.28
IFT140Q96RY7 RNU6-115P-201ENST00000364310 107 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 SNORA51.6-201ENST00000384151 125 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 MIR561-201ENST00000385216 97 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 PIGPP2-201ENST00000411569 458 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 AC073614.1-201ENST00000438690 650 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 AL161788.1-201ENST00000441805 169 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 SNORA62.5-201ENST00000516634 120 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 AC005261.5-201ENST00000596280 355 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 NIFKP6-201ENST00000598115 845 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.83□□□□□ -2.28
IFT140Q96RY7 AC110491.1-201ENST00000562191 2010 ntBASIC0.83□□□□□ -2.28
IFT140Q96RY7 MTND5P11-201ENST00000511037 1812 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms