Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 PTP4A1P4-201ENST00000512479 322 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 SNORA31.3-201ENST00000516029 96 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 RNU6-1225P-201ENST00000516336 65 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AL731537.2-201ENST00000561565 951 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 AL132822.1-201ENST00000617063 513 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC097655.1-201ENST00000635075 318 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 TEX21P-201ENST00000447107 1476 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC42Q96M95 AP000560.1-201ENST00000624150 1937 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC42Q96M95 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 SNORD114-19-201ENST00000363072 75 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 RNU6-468P-201ENST00000384003 109 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 U8.10-201ENST00000384260 133 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 RNA5SP100-201ENST00000410903 110 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 RNA5SP59-201ENST00000410922 110 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 OR6C66P-201ENST00000414917 930 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 FO393414.1-201ENST00000428697 1184 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC079448.1-201ENST00000449377 373 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC005908.1-201ENST00000468701 347 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC099513.1-201ENST00000490423 301 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 MIR5708-201ENST00000579723 85 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC42Q96M95 AL022345.1-201ENST00000607292 135 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC098614.4-201ENST00000607601 462 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 AC093875.1-201ENST00000623688 504 ntBASIC1.23□□□□□ -2.21
CCDC42Q96M95 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC42Q96M95 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CCDC42Q96M95 RNU2-32P-201ENST00000411193 191 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 AC068533.2-201ENST00000411872 306 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 SRIP3-201ENST00000413200 219 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC42Q96M95 COPS8P3-201ENST00000526024 482 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 AC093249.1-201ENST00000567049 203 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 MTATP6P25-201ENST00000574491 261 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC42Q96M95 AC069545.1-201ENST00000605671 358 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 uc_338.12-201ENST00000616344 181 ntBASIC1.22□□□□□ -2.21
CCDC42Q96M95 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
CCDC42Q96M95 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC42Q96M95 RNU6-898P-201ENST00000365627 104 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 SNORA48.1-201ENST00000390879 135 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL359634.1-202ENST00000404721 284 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AC017099.1-201ENST00000448261 1028 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL353718.1-201ENST00000451028 517 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 RPL36AP21-201ENST00000490372 323 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AP003392.2-201ENST00000527269 208 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL133153.1-201ENST00000557756 303 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 AP001542.1-201ENST00000591314 200 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 BNIP3P27-201ENST00000599991 412 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL133445.2-201ENST00000611191 527 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.21□□□□□ -2.22
CCDC42Q96M95 AL356094.1-201ENST00000624663 1212 ntBASIC1.21□□□□□ -2.22
CCDC42Q96M95 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC42Q96M95 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC42Q96M95 CBX3P1-201ENST00000325243 554 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 SNORA7.1-201ENST00000363750 139 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 SNORD14B-201ENST00000364533 90 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 RNU6-609P-201ENST00000365459 107 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 RNU6-546P-201ENST00000383991 107 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 MIR1261-201ENST00000408659 82 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 RPL23AP76-201ENST00000441860 458 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 BTF3P15-201ENST00000455606 336 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 SNORD97-201ENST00000459187 142 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 AP003034.1-201ENST00000534621 422 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 WISP1-OT1-201ENST00000602893 642 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 AC073410.2-201ENST00000603240 332 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC42Q96M95 AC231657.1-201ENST00000624313 397 ntBASIC1.2□□□□□ -2.22
CCDC42Q96M95 AC099654.9-201ENST00000637055 678 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms